Gene Information

Name : Ksed_25710 (Ksed_25710)
Accession : YP_003150298.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Unknown
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2641642 - 2642247 bp
Length : 606 bp
Strand : +
Note : PFAM: Helix-turn-helix domain of resolvase; Resolvase, N terminal domain

DNA sequence :
ATGGAGAGCATGTCCCCCTCGAAGGTCGGCTATGCCCGAGTCTCCACCGACGAGCAGGACCTGACCGCGCAGCGTGACGG
ACTCGCGGCGTTCGGCGTCGATCCCAAGCGCATCTACGTCGATCACGGGCTCACGGGCCGCAACGCCGACCGTGAGGGCC
TGCGGCAGGCGCTGGCTGCCTGTCGGGACGGCGATACGTTCGTGGTCACCAAGCTCGATCGGCTGGCGCGTTCAGTCCGT
GATGCCCACCAGATCGCCGACGACCTCGCGGCGCGGGAAGTGAAGCTGAGCATCGCCGGATCGGTGTACGACCCGACCGA
CCCGATGGGGAAACTGTTGTTCAACGTGTTGGCGATGGTCGCCGAGTTCGAAGCCGACCTCATCCGTGCCCGCACCCGCG
AGGGGATGAAGGTCGCCAAGGCCAAGGGCCGGCTGCGCGGGAAGTCACCGAAACTCACCCCCCGGCAAGAAGCTCACCTC
GTCCAGCTACATGCTGCCGACGAGCACACCGTGGGCGAGCTGGCCGAGCTGTTCAGCGTGGGCCGCTCCACGGTCTACCG
CGCCCTTCAGCGCGCCGAGCGCGGGCGCGAGAACGCCTTGCAGTAG

Protein sequence :
MESMSPSKVGYARVSTDEQDLTAQRDGLAAFGVDPKRIYVDHGLTGRNADREGLRQALAACRDGDTFVVTKLDRLARSVR
DAHQIADDLAAREVKLSIAGSVYDPTDPMGKLLFNVLAMVAEFEADLIRARTREGMKVAKAKGRLRGKSPKLTPRQEAHL
VQLHAADEHTVGELAELFSVGRSTVYRALQRAERGRENALQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 3e-17 43
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 3e-17 43
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 3e-17 43
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 3e-17 43
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 5e-17 43
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 5e-17 43
res AGF35059.1 resolvase Not tested SGI1 Protein 6e-25 42
res AGK06929.1 resolvase Not tested SGI1 Protein 6e-25 42
res AGK06966.1 resolvase Not tested SGI1 Protein 6e-25 42
res AGK07012.1 resolvase Not tested SGI1 Protein 6e-25 42
res AGK07070.1 resolvase Not tested SGI1 Protein 6e-25 42
res AAK02044.1 resolvase Not tested SGI1 Protein 6e-25 42
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 6e-25 42
res AGF34985.1 resolvase Not tested SGI1 Protein 6e-25 42
res AGF35025.1 resolvase Not tested SGI1 Protein 6e-25 42