Gene Information

Name : Ksed_24520 (Ksed_24520)
Accession : YP_003150182.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2531900 - 2532886 bp
Length : 987 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
ATGAGCCACAAGAACGCCGCCCTGACACCCCGCCACCGCTTGAAGGTCGCTCGCCTCGTCGTCGAGGATGGCTGGCCGAT
CAGCGAGGTGGCCGCTCGGTTCCAGGTGTCCTGGCCGACGGTGAAGCGGTGGGCCGACCGCTACCTCGCCGGCGAGTCCA
TGGAAGACCGGTCTTCGCGCCCGAGGGTGTCGCCGAACAAGACCCCGAAGACGGTGACCAAGCGGTGCGTCAGCCTGCGA
ATGCGGTTGCGCGAAGGCCCAGTTCAGCTCGCCGCTCGACTCGGCATCGCACCATCGACGGTGCACCGAATCCTCACGAC
GGCACGCCTCAACCGGCTGTCCTACGTCGACCGTGCCACCGGCGAGCCGATCCGCCGGTACGAACACCCCCATCCCGGCT
CGCTGGTGCACGTGGACGTTAAGAAGCTCGGGAATATCCCCGACGGCGGCGGCTGGCGCTATGTCGGCCGACTCCAAGGC
GAACGCAACCGCGCCGCCACGCCCGGGAAGCCGAAGAGCAAGTGGCACAACCCAAAGCTCGGGTACGCGTTCGTGCACAC
CGTCATCGACGAACACTCCCGCGTCGCGTACACCGAGGTCCACGACGACGAGACCGCCATCACCGCCGTCGCCGTCCTGC
ACCGGGCGGTCGAGTGGTTCGCAGACCGCGGTGTCACCATCGAACGGGTGCTGTCTGACAACGGCGGGGCATACCGGTCA
CACCTGTGGCGCGACACCTGCGAGGCCCTATCGATCACCCCGAAGCGGACCCGTCCGTACCGGCCGCAGACCAACGGAAA
AGTGGAGCGCTTCCACCGGACCATGGCCGACGGGTGGGCGTACGCCCGCTGCTACACCAGCGAGCAAGAAAGACGTGACG
CCCTGCCGGACTGGCTGCACCAGTACAACGAACACCGTCCGCATACCGCCTGCGGCAACCAGCCGCCCTCCTCACGATTG
ATCAACGTGCCCGGTCAGTACAGCTAG

Protein sequence :
MSHKNAALTPRHRLKVARLVVEDGWPISEVAARFQVSWPTVKRWADRYLAGESMEDRSSRPRVSPNKTPKTVTKRCVSLR
MRLREGPVQLAARLGIAPSTVHRILTTARLNRLSYVDRATGEPIRRYEHPHPGSLVHVDVKKLGNIPDGGGWRYVGRLQG
ERNRAATPGKPKSKWHNPKLGYAFVHTVIDEHSRVAYTEVHDDETAITAVAVLHRAVEWFADRGVTIERVLSDNGGAYRS
HLWRDTCEALSITPKRTRPYRPQTNGKVERFHRTMADGWAYARCYTSEQERRDALPDWLHQYNEHRPHTACGNQPPSSRL
INVPGQYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 7e-84 68
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 3e-86 66