|
Name : Ksed_23780 (Ksed_23780) Accession : YP_003150113.1 Strain : Kytococcus sedentarius DSM 20547 Genome accession: NC_013169 Putative virulence/resistance : Resistance Product : arabinose efflux permease family protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2462549 - 2463733 bp Length : 1185 bp Strand : - Note : PFAM: Major Facilitator Superfamily DNA sequence : ATGCCCTTCGCCCTCTACCTGCTTGCCCTGGCTGTCTTTGCCATGGGCACATCTGAGTTCATGCTTGCTGGCCTCGTGCC AGACATCGCCGCCAGTGTCGGTGTCTCTGTCGGCACAGCTGGGTTACTCACCTCTGCCTTTGCGGTCGGGATGATTCTCG GTGCGCCCGCCATGGCAGCTCTCACCCGTCGGTGGCCCGCCCGGACCACCTTGCTCGGGTGCGTAGTCATCTTCGCTGCC TGTCACGTCGTCGCCGCCACTGCCGAGACCTTCTCCGTGCTGTTCGCAACTCGTGTGGTTGCTGCGGTTGCTAACGCCGG GTTCCTGGCCGTTGCACTCAGCACCGCGACCCGCCTCGTGGCCCCCAGCCGGAAGGGCCGCGCTCTTGCCATCCTCCTCT CGGGCACCACGATCGCCATGGTCGCCGGTGTTCCCGCGGGGGCTCTACTTGGCACGGCGCTGGGATGGCGGGCCACGTTC TGGGCGGTAGCCTTCCTGTGCGTTCCTGCTGCAATCGGCATCCTCACCGGGATCCGTCCACAGCCGAGAGACACGCAGGA CGAAGCCAACGATGGCCTGTCTCTCGCCTTCGAGTTGGCGCAGCTCCGCGTGCCCCGTCTTTTCACGGCGATGCTGCTCG CTGCGCTGGTCAATGGCGGGACTTTCGCCGCGTTTACGTTCCTCGCGCCGGTCGTGACCGGGACAGCGGGTCTGGGCCAG GTGTGGGTACCGGTGGCTCTGGTGTTGTTCGGCATCGGGTCCTTCATGGGAGTCAGCATTGCCGGGCGACTGTCTGACCA GCACCCGCGAACGCTCCTCGTTGTGGCCGCGCCGCTCCTGTTAGTTGGGTGGCTGTTGCTCGCGGTGCTTGCTGGGCACT CCGTGCCGCTGCTCGTCCTGGTGTTCCTGCTGGGAATGCTGGCATTCGCTGTGGGAAGCACCATGATCGCTCGAGTGCTC TACGCAGCATCGGAAGCGCCCACCATGGGTGGTTCCTACGCGACTGCCGCTCTCAACATCGGGGCCGCTGCTGGTCCGGC GCTCGGAGCGGTAGCGCTCGAGAGCTCGAGCAACCTTGGTCCCGTGTGGGCAGCGACCGCGCTGACCGCTCTCGCACTCC TCGTGATGCTGCCCACGCTGCGCATGATCGCCCCGCGGGTACGGAATGTGGAGGCTGCCAAGTGA Protein sequence : MPFALYLLALAVFAMGTSEFMLAGLVPDIAASVGVSVGTAGLLTSAFAVGMILGAPAMAALTRRWPARTTLLGCVVIFAA CHVVAATAETFSVLFATRVVAAVANAGFLAVALSTATRLVAPSRKGRALAILLSGTTIAMVAGVPAGALLGTALGWRATF WAVAFLCVPAAIGILTGIRPQPRDTQDEANDGLSLAFELAQLRVPRLFTAMLLAALVNGGTFAAFTFLAPVVTGTAGLGQ VWVPVALVLFGIGSFMGVSIAGRLSDQHPRTLLVVAAPLLLVGWLLLAVLAGHSVPLLVLVFLLGMLAFAVGSTMIARVL YAASEAPTMGGSYATAALNIGAAAGPALGAVALESSSNLGPVWAATALTALALLVMLPTLRMIAPRVRNVEAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cmx | YP_005160007.1 | chloramphenicol exporter | Not tested | Not named | Protein | 5e-75 | 67 |
| cmx2 | YP_001800935.1 | chloramphenicol exporter | Not tested | Not named | Protein | 5e-75 | 67 |
