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Name : Ksed_19710 (Ksed_19710) Accession : YP_003149735.1 Strain : Kytococcus sedentarius DSM 20547 Genome accession: NC_013169 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2055895 - 2057559 bp Length : 1665 bp Strand : - Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC DNA sequence : GTGACCGTGACCGACGGGGAGGTGACCGTGCCGATGACGGCGATCAGCCAGCACGACTCCCCGGACGGCAGCCCCAACGA GGACTTCGTCGTGTACCGCACGATGGGGCCGGGGTCCGACCCGCAGGTGGGCCTGGAACCGGTGCGGCAGGCGTGGATCG AGGCGCGCGGCGACACCGCGACCCATGCCGGGCGGGAGCGTGACCTCGCCGACGACGGGCGCTCGGCCCTGCGGCGCGGG GAGCCCTCGCAGGCGTGGCGGGGTCGGGTGCAGGAGCCGCGGCGCGCGCAGCCGGGCCGGACGGTGACGCAGCTGCACTA CGCCCGCCGGGGCGAGATCACCCCCGAGATGCGGTACGTGGCCCTGCGCGAGGGCTGCGAGGTGGAGCTGGTGCGCTCGG AGGTGGCGGCGGGGCGCGCCATCATTCCGGCGAACGTGAACCACCCCGAGTCCGAGCCGATGGTCATCGGCCGGGCCTTC CTCACCAAGGTGAACGCCAACATCGGCAACTCGGCCGTCACCTCCTCGATCGCCGAGGAGGTGGAGAAGATGTCCTGGGC CACCCGCTGGGGCGCCGACACGGTGATGGATCTCTCCACCGGGGAGGACATCCACACCACGCGGGAGTGGATCCTGCGCA ACTCCCCGGTGCCGATCGGCACGGTCCCCATCTACCAGGCCCTGGAGAAGGTCGACGGCGTGGCCGAGGAGCTCACATGG GAGGTCTTCCGCGACACGGTTGTCGAGCAGGCAGAGCAGGGCGTGGACTACATGACCGTGCACGCCGGGGTGCGGCGGCG GCACGTGCCTCTGACGGCCGGGCGTGTGACCGGCATCGTCTCCCGCGGCGGGTCGATCATGGCCGGGTGGTGCATGGCCC ACCGCCGCGAGTCGTTCCTGTACGAGCACTTCGACGAGCTGTGTGAGATCTTCGCCGCGCACGACGTCGCCTTCTCGCTG GGCGACGGGCTGCGGCCGGGGTCGCTGGCCGACGCGAACGACGCCGCCCAGCTGGCCGAGCTGCGCACCCTGGGCGAGCT GACGCAGCGGGCCTGGGAGCACGACGTGCAGGTGATGGTGGAGGGCCCCGGCCACGTGCCGCTGCACCTGGTCAAGGAGA ACGTGGACCTGGAGCAGGAGTGGTGCCACGGGGCGCCCTTCTACACGCTGGGCCCGCTGGCCACCGACATCGCGCCGGGC TACGACCACATCACCAGTGCCATCGGGGCGGCCCCCATCGCCCAACACGGCACGGCGATGCTCTGCTACGTCACGCCGAA GGAGCACCTGGGCCTGCCGAACCGGGACGACGTGAAGACCGGGGTGATCACCTACAAGATCGCCGCGCACGCCGCGGACG TCGCCAAGGGCCACCCGCGGGCCCGGGACTGGGACGACGCCATGAGTAAGGCGCGCTTCGAGTTCCGTTGGCACGACCAG TTCGCGCTGGCGCTGGACCCGGTGACCGCGCAGGAGTTCCACGACGAGACGCTGCCGGCCGAGCCGGCCAAGAACGCGCA GTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCGATGCGGATCAGTCGTGACATCAACGAGGCCTACGGCGGGCAGATGG CCGCCGAGGCGGGTGCCGCGGCCGTCGGCGAGCCGGTGTTCGTCGAGTTGAGCACCAGGCCGTGA Protein sequence : MTVTDGEVTVPMTAISQHDSPDGSPNEDFVVYRTMGPGSDPQVGLEPVRQAWIEARGDTATHAGRERDLADDGRSALRRG EPSQAWRGRVQEPRRAQPGRTVTQLHYARRGEITPEMRYVALREGCEVELVRSEVAAGRAIIPANVNHPESEPMVIGRAF LTKVNANIGNSAVTSSIAEEVEKMSWATRWGADTVMDLSTGEDIHTTREWILRNSPVPIGTVPIYQALEKVDGVAEELTW EVFRDTVVEQAEQGVDYMTVHAGVRRRHVPLTAGRVTGIVSRGGSIMAGWCMAHRRESFLYEHFDELCEIFAAHDVAFSL GDGLRPGSLADANDAAQLAELRTLGELTQRAWEHDVQVMVEGPGHVPLHLVKENVDLEQEWCHGAPFYTLGPLATDIAPG YDHITSAIGAAPIAQHGTAMLCYVTPKEHLGLPNRDDVKTGVITYKIAAHAADVAKGHPRARDWDDAMSKARFEFRWHDQ FALALDPVTAQEFHDETLPAEPAKNAQFCSMCGPKFCSMRISRDINEAYGGQMAAEAGAAAVGEPVFVELSTRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-172 | 65 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-172 | 65 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 7e-159 | 60 |
