Gene Information

Name : Ksed_18020 (Ksed_18020)
Accession : YP_003149571.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 1874172 - 1875521 bp
Length : 1350 bp
Strand : +
Note : PFAM: Transposase, Mutator family

DNA sequence :
ATGACTGACAAGGAGCAGCGGGCTGGTGCCCAGCCCTCGGGGCAGGACTTGGTGGAGGAGTTGAAGGCTTCGGGGCAGTT
GGACGGCTTGTTCGCGCAGATCGATGCCGGGCAGGTTGAGCTGACCGGGGATGGTGGTTTCGTCCCGGCGTTGGTGAAGG
CTGCCCTGGAGCGTGGGTTGCAGGCCGAGCTCAGCAGTCACCTGGGCTACGAGAAGGGCTCGGTGGACGCTTCAGCGCAC
AGCAACTCGCGCAACGGGTCCACCCCGAAGACGGTCGCCTCAGAGGTGGGATCGATCGAGTTGGACGTCCCCCGGGACCG
GGACGGGTCGTTCACTCCCCGCCTGGTCCCCAAGGGTCAGCGTCGGCTGGGCGGGTTGGACGACATGATCATCAGCCTCT
ACGCCGGGGGCATGACGATCCGGGAGATCCAGCACCACCTGGCTGGCACGATCGGCACCGAGCTGTCCCACGAGACGATC
AGCAAGATCACCGACGCGGTCGCCCAGGAGGTGCTGGCCTGGCAGGACCGGCCGTTGGAGGAGTTCTACCCGGTGCTCTA
CCTAGACGCGATCCGGGTCAAGATCCGCCAGGACCATCAGGTGCTCAATCGGGCGGCCTATCTCGCGGTCGGTGTCGATC
TGGAGGGTGTCAAGCACGTCCTGGGGATCTGGGTCCAGGACACCGAGGGATCGGCGTTCTGGGCTCACGTGTGCGCCGAC
CTGGCCAACCGTGGCGTGTCCGACGTGCTGATCGTGTGCTGCGACGGGCTCAAGGGGCTGCCAGAGGCGATCGAGGCGAC
CTGGCCGGACTCGATGGTCCAGACCTGCGTGGTCCACCTGATCCGCGCGTCCACACGGTTCGTGTCGTACACCGACCGCA
AGAAGGTCGCCAAGGAGCTCAAGCCGATCTACACCGCCGCCACCGAGCAGGCCGCCAGAGCCGCGTTGGAGGACTTCGCG
GCCAGCGAGATGGGCCGGAAGTACCCCTCGGCGGTCGCGACCTGGCAGGCAGCGTGGGAGCGGTTCGTCCCGTTCCTGGC
CTTCCCGCCGATGCTGCGGCGGGTGATCTACACGACGAACTCCATCGAGTCGTTGAACTATCAGCTGCGGAAGGTCACCA
AGTCCCGCGGGCACTTCCCCTCGACCGACGCCGCGGTCAAGCTGCTGTGGCTGGCGATCTGCAACATCGAGGACCGACGA
GCCGCTGAACGAGCCCGTGAGAAGGGCAAGCCGGCGGCCGAACGCAAAGCCAAGGGCCGCCTCGTCCAGGGCCAGGTCGT
CACCAACTGGAAACAGGCACTGGCCCAACTCGCAGCGGCCTACCCCGACCGAATCAACCCCTACCTGTGA

Protein sequence :
MTDKEQRAGAQPSGQDLVEELKASGQLDGLFAQIDAGQVELTGDGGFVPALVKAALERGLQAELSSHLGYEKGSVDASAH
SNSRNGSTPKTVASEVGSIELDVPRDRDGSFTPRLVPKGQRRLGGLDDMIISLYAGGMTIREIQHHLAGTIGTELSHETI
SKITDAVAQEVLAWQDRPLEEFYPVLYLDAIRVKIRQDHQVLNRAAYLAVGVDLEGVKHVLGIWVQDTEGSAFWAHVCAD
LANRGVSDVLIVCCDGLKGLPEAIEATWPDSMVQTCVVHLIRASTRFVSYTDRKKVAKELKPIYTAATEQAARAALEDFA
ASEMGRKYPSAVATWQAAWERFVPFLAFPPMLRRVIYTTNSIESLNYQLRKVTKSRGHFPSTDAAVKLLWLAICNIEDRR
AAERAREKGKPAAERKAKGRLVQGQVVTNWKQALAQLAAAYPDRINPYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 9e-127 56
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 3e-127 56
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 1e-126 54
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 8e-74 44
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 9e-75 43