Gene Information

Name : Ksed_15120 (Ksed_15120)
Accession : YP_003149298.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Unknown
Product : transposase, IS30 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1550774 - 1551931 bp
Length : 1158 bp
Strand : -
Note : PFAM: Integrase core domain

DNA sequence :
ATGCAGGGCAAGCACGGTCATCTCAGTCGGGAGCAGAAGCAGCTCGCGCTCAGGTTGCATGCCAAGGGCTGGCGGCTGGT
CGACATCGCGAAGGAGGTCGGTTGCAGCGCGCCGATGGTTGGCATCATGGCCCGCGCTGGCAGGCACGTCGAGGCCAGGC
CGTTCGGCTGGGAACCACGTCACGGCTGCCTGAGGATCGACGAGCGCGAGCAGATCCTGATCGGGATCAACCGCGGCGAC
ACCTTCACGGCGATCGCGCGCCAGCTGGGTCGGGCCGTGTCCACTGTCAGTCGCGAGGTGAAGCGCGGTGGTGGCCGAGC
CGGGTACTCGGCCTGGCACGCCCACGAGCATGCCCGCGAGCAGGCTCGACGGCCCAAGCGGTTCAAGCTCGCACCGGGCC
GACTCCTCGAGGAGGTGGCCAAGCGTCTCGAGCAGCTGTGGTCACCCCAGGAGATCGCCGCGCGCCTCCGGTTGGATCAC
GCCGACGACCCGGAGATGCGCGTGAGCCACGAGACGATCTACCAGTCGCTGTTCGTGCAGGGACGCGGCGAGCTGCGTCG
CGAGCTGGCCCGGTGCCTGCGGTCCGGCCGCGCCACTCGCAGGCCCCGTGGGACCACCGACGGCCGTGGCCGAATCCCCG
GCATGGTGATGCTCAGCGAGCGTCCTGGCGAGGCAGATGACCGTGCAGTACCGGGTCACTGGGAAGGCGATCTGATCCTC
GGGGAAGGCAGCCGCAGTGCAGTCGGCACCCTCGTGGAACGATCCACCCGGATGACGCTCTTGCTGCACCTGCCAGACGG
GAAGAGCGCTGAGCAGGTAGAGGCCGCGATGCGTGAAGCGATCACGACGTTGCCCACGTCATTGGCCAGGACGATCACGT
GGGACCAAGGCGCCGAGATGTCCAAGCACGCCGCGTTCACCACGGCCACCGGGTTCCCGATCTACTTCTGCGACCCGCAC
TCGCCGTGGCAGCGTGGCAGCAACGAGAACACCAACGGGCTGCTGCGCCAGTACCTCCCCAAGGGCAGTGACCTGAGCAC
CGTCACCCGCGAGGAGCTCGACGCGATCCAGGACAGCCTCAACGGCCGGCCACGCAAGACGCTGGGCTATCTGACACCAT
CAGAGAAGCTCGCAGAGTTCCTTGCACCCACCGCTTGA

Protein sequence :
MQGKHGHLSREQKQLALRLHAKGWRLVDIAKEVGCSAPMVGIMARAGRHVEARPFGWEPRHGCLRIDEREQILIGINRGD
TFTAIARQLGRAVSTVSREVKRGGGRAGYSAWHAHEHAREQARRPKRFKLAPGRLLEEVAKRLEQLWSPQEIAARLRLDH
ADDPEMRVSHETIYQSLFVQGRGELRRELARCLRSGRATRRPRGTTDGRGRIPGMVMLSERPGEADDRAVPGHWEGDLIL
GEGSRSAVGTLVERSTRMTLLLHLPDGKSAEQVEAAMREAITTLPTSLARTITWDQGAEMSKHAAFTTATGFPIYFCDPH
SPWQRGSNENTNGLLRQYLPKGSDLSTVTREELDAIQDSLNGRPRKTLGYLTPSEKLAEFLAPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 2e-56 44
DIP0764 NP_939135.1 transposase Not tested Not named Protein 1e-56 42
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 7e-57 42