Gene Information

Name : Ksed_12930 (Ksed_12930)
Accession : YP_003149090.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1334602 - 1336014 bp
Length : 1413 bp
Strand : +
Note : PFAM: Pyruvate kinase, alpha/beta domain; Pyruvate kinase, barrel domain; TIGRFAM: pyruvate kinase

DNA sequence : 
ATGCGTCGCGCCAAGATCGTCTGCACCCTTGGTCCCGCCACCACCGACGACAGCGTCCTGAGGCAGTTGGTGGAGGCGGG
CATGGACGTGGCCCGGCTCAACATGTCGCACGGCACGCAGGCCGACAAGGAGGGGCTGGTCTCCACGCTGCGCAGCCTGG
ATGCCAACAGCGACCACGCCATCGCGGTGCTGGTGGACCTGCAGGGGCCCAAGATCCGTACGGGCACCTTCGCCGACGGC
CCGGTCGAGCTGGTCGAGGGGGCCACCTTCACCCTCACCACTCGCGAGGTCCCCGGATCGGTCGACGAGGTGGGCACGAC
CTACGCGGGTCTGGCCGCCGACGTCTCGGTGGGGGACCAGCTGCTGCTCAACGACGGCAACATCGAGCTGCGCGCCACCG
AGGTGACGGACACCGACGTGGTCACCACGGTGGTGGTCGGCGGCGAGCTGAGCGACCACAAGGGCATCAACCTGCCCGGC
GTGGCCGTGAGTGTGCCCGCGCTGAGCGACAAGGACGCCGACGACTTGCGCTGGGCGATGGGCCAGGAGGTCGACGCCGT
GGCCCTGTCCTTCGTGCGCACCGCGCAGGACGTCGAGGCCGTGCACGCGGTGATGGACGAGTTCGGCCGCCGCATCCCGG
TGATCGCCAAGATCGAGAAGCCGCAGGCCCTGGAGAACCTCGAGGAGATCGTCGAGGCCTTCGACGGCATCATGGTGGCC
CGCGGTGACCTCGGCGTGGAGATGCCGCTGGAGGACGTGCCCGTGGCCCAGAAGACGATGGTGGAGCTCGCCCGGCGCCG
CGCCAAGCCGGTGATCGTGGCCACCCAGGTGCTCGAGTCGATGATCTCGAACCCGCGCCCGACCCGCGCCGAGGCCTCGG
ACTGCGCCAACGCCGTGCTCGACGGTGCTGATGCGGTGATGCTCTCCGGTGAGACCTCGGTGGGCCAATACCCCGTGGAG
TGCGTGGGGGTGATGACCCGCATCATCGCCTCCACCGAGGAGATGGCCCTCCACCGGATGCGGGGGCTCACCGACATCCC
GCGCACGGTCACCGGTGCCGTGACCCGGGCCGCCGTGGAGGTGGGCCACGAGATCGGGGCGGTGGCCTACGTCGCCTTCA
CCACGACCGGCTCCTCCGCCCGCCGGCTCGCCCGCACGCGGGCCGCGGAGCCGCTGTTGGCGTTCACCCCGGACCCCGCC
ATCCGCCGGCAGCTGGCCCTCACCTGGGGCGTGCAGACCGTGCTGCTGCCCAAGGTGGACAGCATCGAGGAGATGTTCCG
GCAGGTCGACGAGGCCCTGGCCGCCGACGACCGCTTCACCGACGGGGACCGGCTGGTGGTGGTGGCCGGCACCCCCATCG
GCGTGCCCGGGAGCGTCAACACGATGCGGGTGCACGCGCTGGCCAAGGCCTGA

Protein sequence : 
MRRAKIVCTLGPATTDDSVLRQLVEAGMDVARLNMSHGTQADKEGLVSTLRSLDANSDHAIAVLVDLQGPKIRTGTFADG
PVELVEGATFTLTTREVPGSVDEVGTTYAGLAADVSVGDQLLLNDGNIELRATEVTDTDVVTTVVVGGELSDHKGINLPG
VAVSVPALSDKDADDLRWAMGQEVDAVALSFVRTAQDVEAVHAVMDEFGRRIPVIAKIEKPQALENLEEIVEAFDGIMVA
RGDLGVEMPLEDVPVAQKTMVELARRRAKPVIVATQVLESMISNPRPTRAEASDCANAVLDGADAVMLSGETSVGQYPVE
CVGVMTRIIASTEEMALHRMRGLTDIPRTVTGAVTRAAVEVGHEIGAVAYVAFTTTGSSARRLARTRAAEPLLAFTPDPA
IRRQLALTWGVQTVLLPKVDSIEEMFRQVDEALAADDRFTDGDRLVVVAGTPIGVPGSVNTMRVHALAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-73 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-73 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-73 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-73 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ksed_12930 YP_003149090.1 pyruvate kinase VFG0479 Protein 2e-73 42