Gene Information

Name : Kkor_0945 (Kkor_0945)
Accession : YP_003146133.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 993057 - 993695 bp
Length : 639 bp
Strand : +
Note : PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: vsa:VSAL_I2141 response regulator VarA

DNA sequence :
ATGATTAAAGTCTTGCTGGTGGATGATCACGATTTGGTACGCATGGGATTAGGTCGTCTACTTTCCGATGCTGATGGAAT
TGAGGTTGTGGGCGAGGCTGAGTCTGGGGAAGAAGCAATCAAGAAAGTTAAAGAGCTCAATCCTCATGTTGTGATGATGG
ATGCCAATATGCCGGGGATTGGTGGTTTAGAAGCTACCCGACGTATGTTGCGCTTCGAGCCAGACCTTAAGGTAATTGCT
TTAACGGTGCATGGCTCTGAGCCTTATCCAACACAGTTTATTGCTGCAGGCGCGATGGGTTATTTGACTAAAGGTACCGA
TATTAATGAAATGGTTAAAGCCATTCACTCGGTTAATCGCGGTAAACTTTATCTGGCTGCAGAAGTGGCGCAGCAGATGG
CACTCAGCCAGTTTAGCAAAACTGAAGATAATCCTTTTAGTACCTTGTCCGAGCGCGAAATGCAGATCATGTTGATGATC
ACGCGCGGAGAAAAAGTCCAGTCGATTTCCGATAAGTTGCATTTAAGCCCTAAGACGGTGAACAGTTATCGTTACCGTTT
GTTTGAAAAGCTGGGTGTTGAGAATGATGTCAGCCTGACGCATATGGCGCTTCGTTACAAAGTGATCGAGTCCCAGTAG

Protein sequence :
MIKVLLVDDHDLVRMGLGRLLSDADGIEVVGEAESGEEAIKKVKELNPHVVMMDANMPGIGGLEATRRMLRFEPDLKVIA
LTVHGSEPYPTQFIAAGAMGYLTKGTDINEMVKAIHSVNRGKLYLAAEVAQQMALSQFSKTEDNPFSTLSEREMQIMLMI
TRGEKVQSISDKLHLSPKTVNSYRYRLFEKLGVENDVSLTHMALRYKVIESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 4e-50 55
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 4e-50 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kkor_0945 YP_003146133.1 two component LuxR family transcriptional regulator VFG1889 Protein 7e-50 55