Gene Information

Name : Kkor_0832 (Kkor_0832)
Accession : YP_003146020.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 874904 - 875791 bp
Length : 888 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pen:PSEEN4254 site-specific tyrosine recombinase XerD

DNA sequence : 
ATGAGCGAATCGATTATTGAACAGTTCTGTGATCAGGTCTGGATGGAGCAGGGGTTATCCGATGCTACCTTGTCCAGCTA
TCGTAGTGATCTCAAATTGTTCAATCAGTGGCTCCAAAAGCAAGGCAAGGATTTGCTTCGCAGTTCACCATTCGACATCC
AGCAATATTTAGCCGAGCGATATACCAAGCAATACAGTAGCCGTTCTACGGCTCGTTTTTTATCATCTGCCCGTAAGTTT
TACCGTTACTTAATACAGTCGAATCAGATCAAGGTCGACCCGACACAGCAAATCGACAGCCCCAAAATTCAACCGCCAGT
ACCCAAGTCCCTAAGTGAAGACGAGGTGGATAGCTTGCTCAGTCAGCCTGATTTGGAGACGGCACTCGGTTTACGTGACA
AAGCCATGCTGGAGCTTTTATACAGTAGTGGCCTGCGTATTACTGAGCTGATTTCAGTAGAAGTCAACCAGATTGGTTTC
CAGCAGGGTGTAATGCGAGTGATTGGTAAGGGCAACAAGGAGCGATTAGTTCCGATTGGCGAAGAAGCATTACAGGCAAT
ATCGCTATATATCAGACATGGTCGAGCAGAGCTGGCAAACGAAAAAGTTTGCGACTGGTTGTTTTTGAGCACCAGAGGGC
AGAGAATGACGCGCCAGACTTTCTGGCATCGAATTAAGCTTTATGCCAAAACTGCAGGAATCAGAAAGCATTTATCGCCG
CATACCTTACGTCATGCTTTTGCCACACACCTACTGAATCATGGGGCTGATTTGCGTACACTGCAAATGTTGTTAGGGCA
CAGTGATTTGTCAACCACACAAATCTATACTCACGTCGCTAAGGAACGGCTCAAGCAGCTCCATAGCGAGCATCATCCAC
GAGGTTGA

Protein sequence : 
MSESIIEQFCDQVWMEQGLSDATLSSYRSDLKLFNQWLQKQGKDLLRSSPFDIQQYLAERYTKQYSSRSTARFLSSARKF
YRYLIQSNQIKVDPTQQIDSPKIQPPVPKSLSEDEVDSLLSQPDLETALGLRDKAMLELLYSSGLRITELISVEVNQIGF
QQGVMRVIGKGNKERLVPIGEEALQAISLYIRHGRAELANEKVCDWLFLSTRGQRMTRQTFWHRIKLYAKTAGIRKHLSP
HTLRHAFATHLLNHGADLRTLQMLLGHSDLSTTQIYTHVAKERLKQLHSEHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-51 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-51 55