Gene Information

Name : Kkor_0471 (Kkor_0471)
Accession : YP_003145659.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 482960 - 484078 bp
Length : 1119 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: abo:ABO_2174 (S)-2-hydroxy-fatty-acid dehydrogenase

DNA sequence :
ATGTCTTTTACAGCACAAGATTCGAGCTATATGGCGCGAGCCATCCAACTGGCACCTAGAGGCTGGTTTACGACTCGAAC
CAATCCGCGTGTCGGTTGTGTCCTGGTAAAAGATAACATTATTATTGGTGAAGGCTGGCATGAAAAACCCGGCTTTGCTC
ACGCCGAAATCAACGCACTCAATCATGCTGGTGAATCTGCCAAAGGTGCTACGGCTTACGTGACATTAGAGCCTTGTGCT
CACCATGGTAAAACCGGCCCATGTGCTGAGGCTCTTGTGGAAGCTGGGGTCGCTCGGGTGGTGGCGGCCATGCTGGATCC
GAATCCGTTGGTCGCTGGCAAAGGCATGAAGATTCTTGAAAAAGCTGGAATTAAGACTGAATATGGTCTGATGCAGGCCC
AAGCGGAAACTCTTAATCCAGGGTTTATTAAGCGCATGACCAAAGGCTTGCCACGAGTAATTGCCAAAGTTGGTATGAGC
CTGGATGGTCGAACCGCCATGGCCATTGGTGAAAGTCAGTGGATCACTGGAGCAAGTGCCCGTCGTGATGTGCAGCGTTT
ACGCGCCGAGTCAGGAGCTATTATCACAGGTTCTGGCACTGTGGTGATTGATAATCCTTCCATGAATGTCCGCGAACAGG
CTTTTACCGCAAACCCTCATTTCACTCAACCTGTCAGAGTCATCATAGATTCACAAAATATTGTTGAACCTGATGCAAAA
ATATTCAGTCATGAAGGACATTGCTGGTTGGTTAGCGGTCACTTATCCGAAAAAGGTTACCCAGCAAATGTTGAACAGAA
AACAGTCGCATTGTTACCGGGTAAGGATGAGGTTTCTCACCAAAAGGTCGACTTGAAGGCCTTGCTGATAATGTTGGCAG
AAGCTGGAATAAATGATGTGTTGATTGAAGCCGGAAGTGGGCTTGTTGGCGCTTTTGTCGCGCAGGAATTGGTTGATGAA
CTGGTCGTTTATATGGCTCCAAAACTGATGGGCAGTGCCGCCAGACCTATGTTTCAGCTACCGCTGGAAACCATGCAACA
GAATATAGAATTGACCCTCAACGATATTCGGCAGATAGGTAATGATCTGCGTTTGAACTACTATTTTAAAAAGGCTTAG

Protein sequence :
MSFTAQDSSYMARAIQLAPRGWFTTRTNPRVGCVLVKDNIIIGEGWHEKPGFAHAEINALNHAGESAKGATAYVTLEPCA
HHGKTGPCAEALVEAGVARVVAAMLDPNPLVAGKGMKILEKAGIKTEYGLMQAQAETLNPGFIKRMTKGLPRVIAKVGMS
LDGRTAMAIGESQWITGASARRDVQRLRAESGAIITGSGTVVIDNPSMNVREQAFTANPHFTQPVRVIIDSQNIVEPDAK
IFSHEGHCWLVSGHLSEKGYPANVEQKTVALLPGKDEVSHQKVDLKALLIMLAEAGINDVLIEAGSGLVGAFVAQELVDE
LVVYMAPKLMGSAARPMFQLPLETMQQNIELTLNDIRQIGNDLRLNYYFKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-64 50
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-64 50