Gene Information

Name : Kkor_2436 (Kkor_2436)
Accession : YP_003147613.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 2630589 - 2631305 bp
Length : 717 bp
Strand : -
Note : KEGG: amc:MADE_04048 RNase PH (tRNA nucleotidyltransferase); TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGAGACCAAGTGGCCGCACCAGCAATCAGCTTCGTCCAATCACTATTACACGCCAGTTCACCAAGCACGCAGAAGGTTC
AGTACTGATCGAATTTGGTGAAACCAAAGTGCTGTGTAATGCCAGCGTGGTTGATAATGTTCCACGGTTCTTAAAAGGCA
AAGGCCAGGGTTGGATTACGGCTGAATACGGGATGTTACCGCGTTCAACACACTCCCGTATGGATCGCGAAGCTTCTCGA
GGCAAGCAAGGTGGACGAACGCTAGAAATTCAAAGACTTATTGGTCGCTCACTGCGTGCTGCCGTTGACCTGTCACAATT
GGGTGAAAACACCATTTATGTGGACTGTGATGTGCTTCAGGCAGATGGTGGTACTCGCACTGCTTCTATATCAGGAGCGA
GCATTGCTTTGCATGACGCCCTATTTCACATGCGCAAGACCGGCATGATTAAAACTAACCCTCTTAAACATATGGTAGGT
TCAGTTTCTGTCGGAATATACAAAGGCACACCTATTCTGGATCTTGACTACCTCGAAGATTCCGCAGCCGAAACCGACAT
GAATTTAGTGATGGATGAAAATGGCGGCTTTATCGAAATTCAAGGCACCGCAGAAGGCGAAACTTTCACCGGTGATGAAT
TGATGCAAATGTTGGAGTTAGGAAAACAAGGTATTCGCGAAATTTTTGATCTGCAACATAAAGCAGTTGCGGTTTAA

Protein sequence :
MRPSGRTSNQLRPITITRQFTKHAEGSVLIEFGETKVLCNASVVDNVPRFLKGKGQGWITAEYGMLPRSTHSRMDREASR
GKQGGRTLEIQRLIGRSLRAAVDLSQLGENTIYVDCDVLQADGGTRTASISGASIALHDALFHMRKTGMIKTNPLKHMVG
SVSVGIYKGTPILDLDYLEDSAAETDMNLVMDENGGFIEIQGTAEGETFTGDELMQMLELGKQGIREIFDLQHKAVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-65 57