Gene Information

Name : Kkor_2421 (Kkor_2421)
Accession : YP_003147598.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2616591 - 2618693 bp
Length : 2103 bp
Strand : -
Note : KEGG: pin:Ping_3492 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit;

DNA sequence :
ATGGCCATTTCCAAACTTGCAGCTGATATCAACTTAGAAAAACTGCCCTGCACCAGTCTGAAAGGGGTAGGACCCAAAGT
GGCTGAGAAACTGGAAAAGCTGCATATCCAATCGGTACTGGATTTATTGTTCCACCTGCCATTGCGCTACGAAGACAGAA
CCCGAGTGCGTACCATTGCTTCTCTAAAAGACGGTGAGCGCGCCTTAATTAAAGTCACCGTTGAGCTGGCACAAGTTAAA
TTCGGCAAGCGCCGTTCCCTGGTTTGTCGCGCCAGTGATGAAAGTGCCAGCATTGATTTTCGTTTTTTCTATTTTAATAA
AGGTCAGCAACAGCGGCTGCAACGTGGAGCCGAATTTTATGCTTTTGGCGAAGTCAGACGTTATGGTTTCCAATTCTCTA
TGGTGCACCCTGAATTAACCGCGATTAACTCGACCACTAGCGCACCTTTGCTCGAATCCTTAACGCCGATTTATCCAGCT
ACCGAAGGTCTGCATCAAGCCAGTTTTCGGCATATGATGCGCCAAGCTGTTGCGCTACTTAAAAAGCATCCGATTGATAA
TTTGTTGCCGCAATCTTTGCTGCAATCTCTTAAGTTACCTGACGTTAATGCATCATTGGCCTGGATTCATTCACCACCTA
AGGATGCTGACTTAGTACAGTTACAATCAAATCAGACGCCTGCCGTGCGACGCCTGATCAGTGAAGAATTATTAGCCCAG
CAGTTAAGTTTATTGTTACAGCGCAATCAACAAAAAGATTATTCAGCACCAGTGCTAAAAAACTCCGGTAAATTACAAGA
CCAGCTATTGCAGCAGCTGCCCTTTAAGCCGACTAAAGCGCAGCAAAGAGTTACACAAGAAATTATCAGCGATCTGGAAC
AACCGCATCCCATGTTACGTTTATTACAGGGTGATGTGGGTGCAGGTAAAACCCTGGTCGCCGCCCTTGCTGCGTTACAA
GCGATTGAGGCGGGTTATCAAGTGGCGATTATGGCGCCAACCGAATTATTAGCGAATCAACATTATCAATCCTTTGGTCA
ATGGTTTGAGGCGATGAATATTCCTTGCGTTTTCCTGGCTAGCAAATTAACGGCTAGTCAGCGCAAGAGCGCTCTCGAGT
CCATTGCCAGCGGCGAAGCAAAATTAATCGTCGGTACTCATGCGCTGTTCCAGAAAGGCGTCGAATACCACAAATTAGGT
TTAGCCATCATTGATGAACAACATCGTTTTGGCGTAAACCAGCGCCTGATGCTGAAACAAAAAGCACCGGATGGTATGCA
ACTGCACCAGCTGATGATGACGGCCACCCCGATTCCTCGAACCTTGGCCATGACCGTCTATGCCGATATGGATGTCTCGA
TTATCGACGAACTGCCACCCGGCCGAACGCCCGTACAAACGGTGGCTTTATCCGATCAAAAACGCGATCAGGTCATTCAG
CGCATCGAAACTGCCTGTCGTGATGAAAACCGGCAGGTCTATTGGGTCTGCACCCTGATTGATGAATCGGAAGAAATCCA
ATGTCAGGCTGCTGAGTCTGCCGCCAATCTTCTCACCGAACAACTACCCAATTGTCGCGTCGGCTTGTTGCATGGCCGCT
TAAAGCCGGAACAAAAACAGTTGGTTATGGACAAGTTCAAGCAAGGGGATCTTGATATTCTGGTAGCAACCACGGTCATT
GAAGTGGGAGTTGATGTTCCTAACGCCAGTTTGATGGTCATTGAAAACCCGGAACGTCTTGGCTTGTCACAATTGCATCA
ATTACGTGGCCGAGTGGGTCGCGGCTCAGTAGAAAGCCATTGTGTGCTGCTCTATCAGCACCCGCTTTCCGATAACGCCA
AGGCTCGTATTCAGGTCATGCGCGAAACCAATGATGGTTTTGTTATTGCCGAAGAAGACCTGCGTTTGCGTGGTCCCGGC
GAAATGTTAGGCACCCGCCAGACCGGTGAAGTTAGCCTGCGTTTTGCCAATTTAGTGCGCGACGCCGAATTGATTCCGGC
CATTCAGCAACAAGCACATGATTTAATTGCCGAAAATAGTCAGCTTGCACATAAGATCTGCCAACGTTGGCTAGGCTCGC
GTCAGGAATTTGCTGACGTATAG

Protein sequence :
MAISKLAADINLEKLPCTSLKGVGPKVAEKLEKLHIQSVLDLLFHLPLRYEDRTRVRTIASLKDGERALIKVTVELAQVK
FGKRRSLVCRASDESASIDFRFFYFNKGQQQRLQRGAEFYAFGEVRRYGFQFSMVHPELTAINSTTSAPLLESLTPIYPA
TEGLHQASFRHMMRQAVALLKKHPIDNLLPQSLLQSLKLPDVNASLAWIHSPPKDADLVQLQSNQTPAVRRLISEELLAQ
QLSLLLQRNQQKDYSAPVLKNSGKLQDQLLQQLPFKPTKAQQRVTQEIISDLEQPHPMLRLLQGDVGAGKTLVAALAALQ
AIEAGYQVAIMAPTELLANQHYQSFGQWFEAMNIPCVFLASKLTASQRKSALESIASGEAKLIVGTHALFQKGVEYHKLG
LAIIDEQHRFGVNQRLMLKQKAPDGMQLHQLMMTATPIPRTLAMTVYADMDVSIIDELPPGRTPVQTVALSDQKRDQVIQ
RIETACRDENRQVYWVCTLIDESEEIQCQAAESAANLLTEQLPNCRVGLLHGRLKPEQKQLVMDKFKQGDLDILVATTVI
EVGVDVPNASLMVIENPERLGLSQLHQLRGRVGRGSVESHCVLLYQHPLSDNAKARIQVMRETNDGFVIAEEDLRLRGPG
EMLGTRQTGEVSLRFANLVRDAELIPAIQQQAHDLIAENSQLAHKICQRWLGSRQEFADV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 6e-100 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kkor_2421 YP_003147598.1 ATP-dependent DNA helicase RecG BAC0356 Protein 3e-166 54