Gene Information

Name : Kkor_2039 (Kkor_2039)
Accession : YP_003147217.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 2206179 - 2208341 bp
Length : 2163 bp
Strand : -
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: ppu:PP_2193 TonB-dependent siderophore receptor

DNA sequence : 
ATGAAAGTGATAAAAGGCTTTGCATTGGCGGCAGTGGCAATCAGTGTATCGACAGGTTTGCAGGCTAATGAGACAACTTC
AGCTGATGAAGTCATGGTGGTAGTCGGTTCGCGTACACCAACCAGCATCAGCGAGATCCCAAGTTCGGTATGGGTTATCG
ATCGTTCCAGCATTGAGCAGCAACTGGAAACCGGTGTTGATCTTAAAACCATGCTGGGCAAATTAGTTCCAGGTCTTGAT
CTGGCGCCACAAGGGCGTACTAACTATGGGCAGAATTTGCGTGGTCGTGGCGTGCAGGTGCTTATTAACGGTGTCTCTCT
GAACAATTCACGAGGGCTGTCGCGTCAGTTTGATTCTATTGACCCGTTTAACGTTGAGCGTATCGAAGTGATCTCTGGTG
CCAGCAGCTTATACGGTGGTGGTGCGACTGGCGGTATCATCAATATTGTTACCCGACAAGGTTCAAGCAATGGTCTTGAA
ATGACCACTCAAGTGGGTTTTACCACTGGCTTTAACGATAGTAATGACATGACGCATCGCATTAAGCAATCGGTTAGCGG
TGGCAGTCAGGATGTGCAGGGTTATCTGGGTGTTGCATATGAAGATAACGGTCGCTTCTATGATGGCAAAGGTGTTGAGG
TATTCCCGGATATTACGCAAACCGATTTACAGGATAACCGTACCATTGATGTGCTTGGTAGTCTGAACTTTACATTGGAT
GAACAGCAGTCATTGGATTTAGATGCACAGGTTTATCGCTCACAGTTCGACGGTGATCGCGGTGTCTTCTTTCCTAATAT
TGATGCAGCACCAGTGGGCAGTCTGGATGGTGCACGGATTCGTGATGGTTTTGACTCAGATCGTGCACCGGCAACTGACC
GTGAAATGTTTAATGCTCAGTATCATCATGCCGATTTATTGAGCCAGAATTTTTATCTGCAGGCATTTTATCGTAACGAG
GAATCGAGCTTCAGCGCTTTCCCTTACCCTCGACTGATGCCAGCAGAAATGCGCTATGCTATTGAGTTTGGTGCATCCAA
ACAGAACACACAGCTATCAGGTTTTAAAGCTTTGTTTGATGCCGAAGTTAGCGACAGCTTGCGTATGACTTATGGTGTGG
ATTTTGATGCCGAAGAGTTTGATGCTAACCAGATGTTCTTTGATTTGCCGACTACAGACGCTTCAGGTGGCCTAGTGCAA
AATCAGTCACGTATTGAACCACGTTATCCAAGCTACGAAGTGGATGGTCTATCAGGCTTTGTGCAGACAGACTGGAGTCT
TAATGAGCACTGGAAACTGGCAGCAGGTTTACGCCAGCAACGAATGGACGTCACGGTAAAAGATTTTAATAAATACAGCT
ATGACGCAATGGGTCAACGGGTGAGTGTTTTAATCCCGGGCGGTAGCAATGACTATGATGCCAGCCTGTTCAATGCCAGT
GTTATGTATCGTCTGGATGAACACCAAACCTGGTTCCGTTTCAGCCAGGGCTTCGAGCTTCCTGATCCGGCGAAATACTA
CGGTAAAAGCCCGGATGTTAACGTCAACGATAATCCGTTAACAGCGGTTGAAACGGATCAGTTTGAACTGGGCTGGCGTT
TGCTGGGCGATAACTGGCAGGCGCAGACCTCACTGTATTATTCATGGTCAGATAAAGCCGTGACCAATGATGCAAACCTC
AATGTGATTGTGGTAGATAACAAAACTCGTGATTACGGTTTTGAGGGAGCTATTACTCGTTACTTTGATGATGGTTTTGA
GACTGGTGCAACCTTGAACTGGGTTCGTTCAGAGCAGGAAGATGCGAGTGGTGATTGGATGAAGCGAGATGTTCGATATG
CTTCAGTACCTTCTGCTACGGCGTATTTCGGATGGAGCAACGTCGATTACACCGCTCGGCTGCAGGCTAATCATGCATTT
AACATGGAAGATGATACGGGTCGTGAACTAGTCGGTTATACAACTTTTGACGTTAGCCTTAACACTGAAACCCAATACGG
TAAATTCAGTCTGGGGATTACCAATCTGTTGGATAAAGAATACACCACTGTATGGGGGCAACGTGCTACGGCATTTTATT
CGCCGGCTTATGGCCCTGAGTATTTATTTAACTTCCAGGGACGCGGTAGAACCTATACTCTGAACTGGACGGTTAGCTAC
TAA

Protein sequence : 
MKVIKGFALAAVAISVSTGLQANETTSADEVMVVVGSRTPTSISEIPSSVWVIDRSSIEQQLETGVDLKTMLGKLVPGLD
LAPQGRTNYGQNLRGRGVQVLINGVSLNNSRGLSRQFDSIDPFNVERIEVISGASSLYGGGATGGIINIVTRQGSSNGLE
MTTQVGFTTGFNDSNDMTHRIKQSVSGGSQDVQGYLGVAYEDNGRFYDGKGVEVFPDITQTDLQDNRTIDVLGSLNFTLD
EQQSLDLDAQVYRSQFDGDRGVFFPNIDAAPVGSLDGARIRDGFDSDRAPATDREMFNAQYHHADLLSQNFYLQAFYRNE
ESSFSAFPYPRLMPAEMRYAIEFGASKQNTQLSGFKALFDAEVSDSLRMTYGVDFDAEEFDANQMFFDLPTTDASGGLVQ
NQSRIEPRYPSYEVDGLSGFVQTDWSLNEHWKLAAGLRQQRMDVTVKDFNKYSYDAMGQRVSVLIPGGSNDYDASLFNAS
VMYRLDEHQTWFRFSQGFELPDPAKYYGKSPDVNVNDNPLTAVETDQFELGWRLLGDNWQAQTSLYYSWSDKAVTNDANL
NVIVVDNKTRDYGFEGAITRYFDDGFETGATLNWVRSEQEDASGDWMKRDVRYASVPSATAYFGWSNVDYTARLQANHAF
NMEDDTGRELVGYTTFDVSLNTETQYGKFSLGITNLLDKEYTTVWGQRATAFYSPAYGPEYLFNFQGRGRTYTLNWTVSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 2e-124 41
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 2e-124 41
iutA AAK71635.1 IutA Virulence SHI-3 Protein 1e-124 41
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 3e-124 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kkor_2039 YP_003147217.1 TonB-dependent siderophore receptor VFG0619 Protein 7e-125 41
Kkor_2039 YP_003147217.1 TonB-dependent siderophore receptor VFG1085 Protein 9e-125 41
Kkor_2039 YP_003147217.1 TonB-dependent siderophore receptor VFG0936 Protein 1e-124 41