Gene Information

Name : Kkor_1881 (Kkor_1881)
Accession : YP_003147061.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Resistance
Product : transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2034873 - 2035511 bp
Length : 639 bp
Strand : -
Note : KEGG: swp:swp_3307 transferase hexapeptide repeat protein

DNA sequence : 
TTGAACGGTCCTAATCCTAATGATAAAGAGCCCTTGAAGGGTTTTCCTCAGGTTGGTTTTCTTAAGAATTTTATAAGCTC
ACCGAATATTGAGGTGGGCGACTATACTTATTACGATGATCCTGACGGGCCTGAGAACTTTGAAGCTAATGTGCTTTATC
ATTTCCCTTTTATTGGAGATAAGTTAAAGATTGGCAAGTTTTGTGCCATTGCAAAAGGCGTAAAGTTTATTATGAATGGT
GCAAACCATAAGGTGTCTGGGTTTTCTACTTATCCATTTTATATCTTTGGCAACGGTTGGGAGAAAGTTTTACCGGGTGA
AGGTGAGTTGCCATACAAAGGCGATACTGTCATCGGTCATGACGTTTGGCTTGGATATGAGTCTACGATCATGCCTGGCG
TTTCTATTGGTGATGGTGCGATTGTTGCGAGTAAGTCTGTGGTAACGGCTGATGTACCAGCTTACAGCATCGTTGGTGGT
AATCCTGCAAAGGTTCTTAAGCTGCGATTCGATGAGGCGACCATCGAAAAGTTATTATCGATTGCTTGGTGGAATTGGAG
CGCTGAGAAAATTACCGAGAATCTTGAAGCTATCGTTAATAGCGATATTGAAGCACTGAGTAAAGCTGGTGATCTGTAA

Protein sequence : 
MNGPNPNDKEPLKGFPQVGFLKNFISSPNIEVGDYTYYDDPDGPENFEANVLYHFPFIGDKLKIGKFCAIAKGVKFIMNG
ANHKVSGFSTYPFYIFGNGWEKVLPGEGELPYKGDTVIGHDVWLGYESTIMPGVSIGDGAIVASKSVVTADVPAYSIVGG
NPAKVLKLRFDEATIEKLLSIAWWNWSAEKITENLEAIVNSDIEALSKAGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 5e-27 44
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 5e-28 42
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 5e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kkor_1881 YP_003147061.1 transferase AM180355.1.gene2499. Protein 6e-39 52
Kkor_1881 YP_003147061.1 transferase AY123251.gene2.p01 Protein 2e-27 44
Kkor_1881 YP_003147061.1 transferase CP001581.1.gene990.p Protein 3e-28 43
Kkor_1881 YP_003147061.1 transferase AY740681.1.gene5.p01 Protein 3e-28 42
Kkor_1881 YP_003147061.1 transferase AF322577.2.gene4.p01 Protein 3e-28 42
Kkor_1881 YP_003147061.1 transferase NC_002516.2.878374.p Protein 5e-29 42
Kkor_1881 YP_003147061.1 transferase JF268688.1.gene6.p01 Protein 3e-29 41