Gene Information

Name : Kkor_1765 (Kkor_1765)
Accession : YP_003146945.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1909904 - 1911079 bp
Length : 1176 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: ilo:IL0219 cystathionine gamma-synthase

DNA sequence :
ATGTCTGATAAAAAATTGAAATTTGCTAGCCGCGTTATTCACGCAGGTCAATCACCTGAGCCGATTACTGGCGCGGTAAT
GCCTCCTATTTTCACCACTTCAACCTATGCTCAGCCAAGTCCTGGCGAGCATACAGGTTATGAGTATTCGCGTAGTCAGA
ACCCAACGCGTATGGCTTATGAGCGCTGTGTGGCGGATTTAGAAGATGGAAAACAGGGTTATGCCTTTGCTTCTGGCATG
GCAGCTACCAGCACCATTCTTGAGTTACTGGATGCTGGTTCGCACGTTATTGCGATGGATGATTTGTATGGTGGTACTTT
CCGTTTGTTTGACAAAGTGCGTAAGCGTACGGCCAATCTTGATTTTAGCTTTGTCGATCTGTCCGATCTAAGCAACCTGG
AAAAGGCACTCAAACCTAACACCAAAATGATCTGGGTTGAGAGTCCAACCAACCCCATGCTGAAAGTTGTAGACATGCAG
GCGATTGCTGACTTTGCTAAGAAGCATAACTTGATTGCTATAGCTGATAACACTTTCGCTACACCATACAATCAACAACC
ATTGAATTATGGTTTTGATATCGTGATGCACTCAGCGACTAAATACTTAAATGGCCATTCTGATATGGTTGGCGGTATGG
CCGTGGTTGGGGACAACGATGAACTTCGTGAGCAAATGGCATTTTTGCATAACTCAGTGGGAGCGATTCAGGGACCATTC
GATAGTTACCTGGCTTTGCGCGGCGTCAAAACGTTAGCACTGCGTATGAAGCAGCATAACGCTAGTGGCCAAATCATTGC
TGAGCATTTAGCCAAGCACCCGCAAATTGATGCAGTCTACTTCCCGGGCCTTGCTTCGCATCCGCAACATGAGTTGGCGA
AAAAGCAGATGAAAGGCTTCGGTGGTATGATCTCGGTTTTGGTTAAAGGCGATACTGAAGAACAGGCGGCCAAGAATTCA
TGCACTTTTATGGAGAAGCTGAAACTATTCACATTGGCTGAAAGTTTAGGTGGTGTTGAAAGTCTGTCTAACCATCCTGC
GATCATGACCCATGCATCTGTGCCTTATGAGATCCGTCAGGAAATTGGCATTTTGGAAAACCTGGTGCGTTTGTCAGTGG
GCATTGAAGATGTTGAAGATCTGATTGCTGATATTGATCAGGCATTGAAGTTCTAA

Protein sequence :
MSDKKLKFASRVIHAGQSPEPITGAVMPPIFTTSTYAQPSPGEHTGYEYSRSQNPTRMAYERCVADLEDGKQGYAFASGM
AATSTILELLDAGSHVIAMDDLYGGTFRLFDKVRKRTANLDFSFVDLSDLSNLEKALKPNTKMIWVESPTNPMLKVVDMQ
AIADFAKKHNLIAIADNTFATPYNQQPLNYGFDIVMHSATKYLNGHSDMVGGMAVVGDNDELREQMAFLHNSVGAIQGPF
DSYLALRGVKTLALRMKQHNASGQIIAEHLAKHPQIDAVYFPGLASHPQHELAKKQMKGFGGMISVLVKGDTEEQAAKNS
CTFMEKLKLFTLAESLGGVESLSNHPAIMTHASVPYEIRQEIGILENLVRLSVGIEDVEDLIADIDQALKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-82 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-83 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-58 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kkor_1765 YP_003146945.1 cystathionine gamma-lyase BAC0207 Protein 1e-66 44