Gene Information

Name : Kkor_1442 (Kkor_1442)
Accession : YP_003146622.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1546555 - 1549149 bp
Length : 2595 bp
Strand : +
Note : KEGG: vfm:VFMJ11_0536 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair p

DNA sequence :
ATGGGCATGACAGAACAAGAAACCTCCCCAAAACATCTCGATCAACACACGCCCATGATGCGCCAATACTGGCAGCTCAA
ACAGGATCATATGGATTACCTGTTGTTTTATCGCATGGGGGATTTTTATGAGCTTTTTTATGACGATGCCAAGCGAGCAG
CTGAATTACTCGATATCACTCTGACCAAGCGCGGTAGCTCTGCCGGTGAACCGATTCCGATGGCAGGCGTGCCCTTTCAT
GCGGTTGACTCTTATCTGGCTCGTATCGTTAAGCTTGGCGAGTCAGTGGCTATCTGCGAACAGATTGGCGATCCGGCGAC
CAGCAAAGGTCCGGTTGATCGCAAGGTAGTTCGCATCGTCACGCCGGGCACTCTGTATGATGAAAACCTTCTGGATGCCC
TCTCCGATAAACTATTGGCCGCTGCCTATAAAAAACGCAACCATTATGGTCTGGCTTGTCTGGATATGGCCAGTGGTCGT
TTCTGGTTATCCGAGTTTGATAATAAGAATGCCTTTCAGGCCGAGCTGTTTCGGATTAAACCGGCAGAATTAATTCTTGC
CGACAATCAACAGGAACTTACCCAGGGCTTAACGACCGCCAACAAATGGCAACCGGACTGGGCCTTTGATTTCGAGCAGA
ACCGCGACAAACTGTTAAATCACTTTGCCGTACAAAGCCTGGCGTCTTTTGGTTGTGAGGATTATGAGCTGGCAATTTGC
GCCGCCGGCGCTGTGTTGGATTACGCTAAAACCACTCAGCTCAATAACCTGCCCCACATTCACCTGTTACAAAAACTCGA
ACACAGCGATCAGCTGGTGCTTGATCCGGCCACTCGCCGCAACCTGGAACTGACCGAGAATATTCAGGGTGGCCAAAACA
ACACCCTGTTCGAGGTAATGAATTCGACCAAAACGGTGATGGGAGCACGCCTGTTAAAACGCTGGTTACACGCGCCTCTT
AGTTCCCATGACAATGTGCAGAAACGGTTGGATAGCGTTGAGAATCTAACTCACGATCATGCCTTTGTGTCGATTCAGCC
GATTCTGTCTGAGATTGCGGATATCGAACGGATTGTCACCCGAATTGCTCTGGCCAGCGCCAACCCTCGCGATTTAAAAC
GCCTGCAACAGGGTTTAACCCAATCAACACTGTTGCTCGATGAATTGCAGCAACTTAATATCAAACTCGACCAGGCCCAA
TACATTCAGCCGCTGCCTGAGTTGCAGCAACTGCTTGAGCACGCCTTAGTTGAACAACCACCGATGGTCATTCGTGATGG
TGGCGTGATTGCTCAGGGCTTTAATGCTGAGCTGGATGAATTACGTTCACTGGCCGATGATGCCAATGAATTCATGTTGT
CTTTGGAGCGACGAGAAAAACAAGAGTCCGGCATCAATACCTTAAAAGTTGGCTATAACAAGGTGCATGGTTTTTATATC
GAGATTTCTCGCGCGCAAAGCCATCAGGCACCGGCGCATTATATTCGCCGCCAGACTTTAAAAAATGCTGAGCGTTTTAT
TACACCGGAATTAAAAGAATACGAAGAAAAGGTTTTAACCAGTAAAACTCGAGCATTAGCACTTGAGAAAAGACTTTATG
ATGAGCTGATCCAGGAACTGCAACAGCATGTGGCGAAGATTCAATCGACTGCCAGCGCGATTGCCGAAATTGATGTGCTG
GCCTGTTTTTCTGAGCGGGCAACCAACCTTGGATTTAATCGCCCGACATTAAGCAATAAAGACGGCATTGAAATCAAACA
GGGCCGGCACCCAGTAGTTGAGTTCCACAGCAAAGAACCCTTTATTCCGAATAACCTCAATATCAACAATCAGGAACGTT
CGCTGATCATTACTGGCCCCAACATGGGCGGTAAATCAACCTACATGCGGCAAACCGCACTGATTACCCTGCTCGCTTAC
GTGGGTTCTTATGTGCCAGCAGAGCATGCGGAAATTGGCCCAATCGATCGCATCTTTACTCGAATTGGTGCATCGGATGA
TCTAGCCAGCGGTCGCTCAACATTCATGGTGGAAATGTCCGAAACCGCCAACATTCTAAACAATGCCACCAGCAACAGCT
TAATTCTGCTCGATGAAATTGGCCGCGGCACCAGTACCTTTGATGGCTTGGCATTGGCCTCAGCGACCATTCAATATATC
CATGAAAAATTGCAGTCCTACACCCTGTTCGCCACTCACTACTTCGAGCTGACGCAGCAGGCAGAACAATGGGACGCCAT
GGTTAATTTGCACTTCTCAGCAACGGAGCATAAAGATGCTGGGCAGGAAAAACTGATCTTCTCGCATCAGATTCAAGCGG
GACCCGCTAATCAAAGCTATGGTATTCAGGTGGCGCAACTAGCCGGACTACCAAAAACAGTGATTCAACAGGCGCGCCTA
CTGCTACAGCATTTTGAACAGCACGGCACTCATGAAACCGAACTGCCGCAGATTGAACTGGAACTCTTAGAATCAGCGCA
ATCTAATCCTGAACTGGAAGCAATGGCGGAACTCGTACAATCTGCCAACCTTGATGAGATGACACCACGCGAGGCGCTTG
AACTATTGTATAAGCTGAAAGAATCGCTACAATAA

Protein sequence :
MGMTEQETSPKHLDQHTPMMRQYWQLKQDHMDYLLFYRMGDFYELFYDDAKRAAELLDITLTKRGSSAGEPIPMAGVPFH
AVDSYLARIVKLGESVAICEQIGDPATSKGPVDRKVVRIVTPGTLYDENLLDALSDKLLAAAYKKRNHYGLACLDMASGR
FWLSEFDNKNAFQAELFRIKPAELILADNQQELTQGLTTANKWQPDWAFDFEQNRDKLLNHFAVQSLASFGCEDYELAIC
AAGAVLDYAKTTQLNNLPHIHLLQKLEHSDQLVLDPATRRNLELTENIQGGQNNTLFEVMNSTKTVMGARLLKRWLHAPL
SSHDNVQKRLDSVENLTHDHAFVSIQPILSEIADIERIVTRIALASANPRDLKRLQQGLTQSTLLLDELQQLNIKLDQAQ
YIQPLPELQQLLEHALVEQPPMVIRDGGVIAQGFNAELDELRSLADDANEFMLSLERREKQESGINTLKVGYNKVHGFYI
EISRAQSHQAPAHYIRRQTLKNAERFITPELKEYEEKVLTSKTRALALEKRLYDELIQELQQHVAKIQSTASAIAEIDVL
ACFSERATNLGFNRPTLSNKDGIEIKQGRHPVVEFHSKEPFIPNNLNINNQERSLIITGPNMGGKSTYMRQTALITLLAY
VGSYVPAEHAEIGPIDRIFTRIGASDDLASGRSTFMVEMSETANILNNATSNSLILLDEIGRGTSTFDGLALASATIQYI
HEKLQSYTLFATHYFELTQQAEQWDAMVNLHFSATEHKDAGQEKLIFSHQIQAGPANQSYGIQVAQLAGLPKTVIQQARL
LLQHFEQHGTHETELPQIELELLESAQSNPELEAMAELVQSANLDEMTPREALELLYKLKESLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kkor_1442 YP_003146622.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 55