Gene Information

Name : Kkor_1430 (Kkor_1430)
Accession : YP_003146610.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Resistance
Product : sigma 54 interacting domain-containing protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1534706 - 1535464 bp
Length : 759 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00283 ABC transporter ATP-binding protein

DNA sequence :
TTGTCTGAAATACTATCTACTAAAGAAGAAACTCGTGATTCATCATCAACTCAGTCAAAGCCTGTGTTGCATGCGCACAA
TCTGACTAAGGTTTATAAGACCGGGGAGGTTGAGGTTAAGGCGTTGGATGGCGTTGATTTTCAGGTGTTTGAGCATGAGA
TGGTGGTTTTGCTGGGGGAGTCTGGAAGCGGCAAGTCGACGCTGCTGAATATTCTCGGTGGTCTGGATGTGGCGACTTCG
GGTGAGGTGTATTTCAAAGACCGGCTGATTAGCTCTGACAGTAAGGGGCTTTTGACCAGTTTTCGTCGCGAGCATGTGGG
GTTTGTGTTTCAGTTTTATAATCTGATTCCGAGTCTTACGGCTTTAGAGAATGTCGCTTTAGTCACTGAGATTGCTAAAA
ATCCTATTAAGCCTGAAGAAGCGTTAGATTTGGTCGGTTTGTTACCGCGAAAGGATCATTTCCCTGGGCAACTTTCGGGC
GGCGAGCAGCAGCGCGTTGCGATTGCCAGGGCGATCGCCAAGCAACCTGAAATTCTGTTGTGCGATGAGCCGACCGGGGC
TTTGGATCATCAGACCGGTATTTTGGTGCTGGAAGCTATTGAGCAGGTCAATCGTGAGCTGGGTACTGCGACGGTGGTGA
TTACCCATAATACGTCGGTGGGCGGCATTGCTGATCGCGTGGTGACGCTTCGCGATGGCAAGGTTTCTGATATCCAATCC
AATTCAAACCGTTTGTCTCCGAGCGAGTTAAAGTGGTGA

Protein sequence :
MSEILSTKEETRDSSSTQSKPVLHAHNLTKVYKTGEVEVKALDGVDFQVFEHEMVVLLGESGSGKSTLLNILGGLDVATS
GEVYFKDRLISSDSKGLLTSFRREHVGFVFQFYNLIPSLTALENVALVTEIAKNPIKPEEALDLVGLLPRKDHFPGQLSG
GEQQRVAIARAIAKQPEILLCDEPTGALDHQTGILVLEAIEQVNRELGTATVVITHNTSVGGIADRVVTLRDGKVSDIQS
NSNRLSPSELKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kkor_1430 YP_003146610.1 sigma 54 interacting domain-containing protein NC_012469.1.7685735. Protein 1e-49 50
Kkor_1430 YP_003146610.1 sigma 54 interacting domain-containing protein CP001581.1.gene798.p Protein 1e-36 43
Kkor_1430 YP_003146610.1 sigma 54 interacting domain-containing protein CP001581.1.gene598.p Protein 2e-35 42
Kkor_1430 YP_003146610.1 sigma 54 interacting domain-containing protein NC_008702.1.4606598. Protein 1e-25 42