Gene Information

Name : Kkor_0126 (Kkor_0126)
Accession : YP_003145315.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 127171 - 129018 bp
Length : 1848 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
GTGGCAAAGAATGATCCCATCGATTTAAATAAACATAAAATAACTCGCGAACCTTTACCTAAATCACAAAAAATTTATGT
GCCTGGACATCTGCATGAAGATATTCGCGTACCGATGCGCGAAATTAGTCTGACCAATGGTGAAAAAGTCACGCTATATG
ATACCTCTGGTCCTTACACCGATCTGAGCATTGAAATTGATGTGCGCAAAGGTTTGCAGGAAGTACGTCGTAACTGGGTG
GTTGGTCGTGGTGATGTGGAAGAATATCAAGGACGTGCAGTTAAGCCGATTGATAATGGCTATGAAGATGGCGATAAAGC
CTTTGTCACCCATAATCCTGAGCTGCAACGCAAACCACTCCGTGCCAAAGTCGGCAACAATGTCACCCAGCTACACTATG
CACGCCAGGGAATTGTTACGCCAGAAATGGAGTATGTAGCAATCCGTGAAAATCAAAAACGTGCAGCGTTATCTGAGGAA
AAGGCTAATAGCGAAAGAGAAGAGCGATTAAAAGGTGAGTCGTTCGGTGCCAATCTTCCGCCAGCAATCACACCAGAATT
CGTGCGAGATGAAATTGCAGCCGGGCGTGCGATTATACCGGCCAATATTAATCACACTGAATTAGAGCCGATGATCATTG
GCCGCAATTTCTTGGTTAAGATCAATGCAAACATTGGTAACTCTGCCGTAACATCCAGCATCGAAGAAGAAGTTGAAAAA
CTGGTGTGGTCGACGCGATGGGGTGGTGATACGGTCATGGATTTGTCGACCGGAAAAAATATCCATGCCACACGTGATTA
TATTTTGCGAAATTCTCCGGTACCAATTGGTACTGTACCGATTTATCAGGCTCTGGAAAAAGTCGGTGGCGTCGCGGAAG
ATCTGACATGGGAAGTATTCAGGGATACATTGATTGAACAGGCTGAGCAAGGGGTGGATTACTTTACCATTCATGCTGGC
GTTTTACTGCGCTATGTGCCCTTAACTGCTGACCGAGTAACCGGTATCGTGTCACGCGGTGGCTCCATTATGGCTAAATG
GTGTATTGCGCATCATAAAGAGAACTTCCTCTATACCCACTTTGAAGAGATCTGCAAAATCATGAAAGCTTACGATGTAA
GCTTCTCGCTGGGAGATGGCCTACGTCCGGGTTCATTGGCGGATGCCAATGATGCGGCGCAATTTGGTGAGTTGGAAACA
TTAGGTGAATTGACCAAGATTGCCTGGGAACATGATGTGCAGGTCATGATAGAAGGCCCGGGTCACGTGCCGATGCACAT
GATCAAAGAAAATATGGATAAGCAGTTGAAAGAATGTCACGAAGCACCTTTCTATACGCTTGGTCCATTGACTACCGATA
TCGCACCGGGTTACGACCATATTACTTCCGGCATTGGTGCCGCAATGATTGGTTGGTACGGTTGTGCCATGCTGTGTTAC
GTGACGCCCAAAGAGCATTTGGGTTTGCCAAATCGTGATGATGTTAAAACCGGAATCATCACCTATAAATTAGCCGCGCA
TGCAGCAGACATCGCAAAAGGACATCCAGGCGCACGCTACCGCGATGATCAATTATCACAAGCGCGATTTGAATTCCGCT
GGGAAGACCAATTCAACTTAGGACTTGATCCGGATACAGCGCGAGAATTCCATGATGAAACATTACCGAAAGATTCCGCA
AAAGTGGCACACTTCTGTTCCATGTGTGGACCAAAATTCTGTTCCATGAAAATTTCACAGGATGTTCGTGACTATGCTGA
GGAGAAGAAAAAAATAGAGCAAGGTATGGCAGAAAAGTCAGCGGAATTTAAAAATCAGGGCGCAGAAATTTATGTTGAGG
TTAAATAG

Protein sequence :
MAKNDPIDLNKHKITREPLPKSQKIYVPGHLHEDIRVPMREISLTNGEKVTLYDTSGPYTDLSIEIDVRKGLQEVRRNWV
VGRGDVEEYQGRAVKPIDNGYEDGDKAFVTHNPELQRKPLRAKVGNNVTQLHYARQGIVTPEMEYVAIRENQKRAALSEE
KANSEREERLKGESFGANLPPAITPEFVRDEIAAGRAIIPANINHTELEPMIIGRNFLVKINANIGNSAVTSSIEEEVEK
LVWSTRWGGDTVMDLSTGKNIHATRDYILRNSPVPIGTVPIYQALEKVGGVAEDLTWEVFRDTLIEQAEQGVDYFTIHAG
VLLRYVPLTADRVTGIVSRGGSIMAKWCIAHHKENFLYTHFEEICKIMKAYDVSFSLGDGLRPGSLADANDAAQFGELET
LGELTKIAWEHDVQVMIEGPGHVPMHMIKENMDKQLKECHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCY
VTPKEHLGLPNRDDVKTGIITYKLAAHAADIAKGHPGARYRDDQLSQARFEFRWEDQFNLGLDPDTAREFHDETLPKDSA
KVAHFCSMCGPKFCSMKISQDVRDYAEEKKKIEQGMAEKSAEFKNQGAEIYVEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 69
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 69
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68