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Name : Shel_08690 (Shel_08690) Accession : YP_003143265.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 1008866 - 1009402 bp Length : 537 bp Strand : + Note : PFAM: KOW motif; Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG DNA sequence : ATGGCTAAGAAGTGGTACGTCCTGCATACCTATTCCGGGTACGAAAACAAGGTGAAGCAGACCCTCGAAAGCCGTGTCGA GATGATGGGCCTCGAGGATAGCATCGTCGATATACAGATCCCGACCGAGATGGTTACCGAAATCAAAGAAGGCGGCCGTC GCGTCGAGAGCGAAAAGAAGGTATTCCCGGGCTACGTGCTGGTCCGCATGGAGATGAACAACCAGAACTGGTCGGTCGTT CGCAACACTCCCGGCGTCACCGGTTTCGTTGGCGGACAAGGCGAACCTGAACCGCTGACCCGCGAGGAATACAACAAGAT CATGAAGCGCACCTCCGTTAAGGCGGGCGCTCCGAAGAAGACCTCCACTTCGCTTGAAGTGGGGCAGTCCGTGAAGGTCA CCAGCGGCCCCTTGGCCGATTTCGACGGCACCGTTTCCGAAGTGTCGCCCGAAGCCGGCAAGGTGAAGGTCCTGGTTTCG ATCTTCGGCCGCGAGACCCCCGTCGAGCTTTCGTTCGACCAGGTAGCTCGCATTTAA Protein sequence : MAKKWYVLHTYSGYENKVKQTLESRVEMMGLEDSIVDIQIPTEMVTEIKEGGRRVESEKKVFPGYVLVRMEMNNQNWSVV RNTPGVTGFVGGQGEPEPLTREEYNKIMKRTSVKAGAPKKTSTSLEVGQSVKVTSGPLADFDGTVSEVSPEAGKVKVLVS IFGRETPVELSFDQVARI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 2e-35 | 43 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 2e-35 | 43 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 2e-26 | 41 |
