|
Name : Shel_00830 (Shel_00830) Accession : YP_003142506.2 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Unknown Product : membrane protein Function : - COG functional category : S : Function unknown COG ID : COG1288 EC number : - Position : 110548 - 112131 bp Length : 1584 bp Strand : + Note : PFAM: Citrate transporter DNA sequence : GTGTCAGAAACAGTTGCAACCATGGACTCCGTCGGCGTAGCCGAGGAGCCGAAAAAGAAGAAGCACACGTTCACGTTCCC GTCAGCATTCACGGTGCTGTTCATCGTCACGATCATCGCAGTGGCGTGCACGTACCTTATTCCGGCGGGCCAATACAGCA AGTTGATCTATGCCGCAGACAGCAACGTGCTGCAAATCACGGATCCCGCTGGCGAAGTGACGGAGCTCGAGGCTACGCAA GATACCCTCGACGAGTTGGGGGTGAAGATCGAAATCGAGCAATTCACCTCGGGCGCAATCACCAAGCCGATTTCCATTCC CGGCACCTACGAAAGCCTGGAGCAGAACCCAGTAAGCTTCCTGGACATTCCCTACAGCATGGTTGTCGGCATCATCGACG GCGTAGATGTCATGGTGTTCATCCTGTGCTTGGGCGGTTTGATCGGCGTCGTGCGCGCAACGGGCGCTTTCGAGAGCGGC CTGGGTGCACTGACCAGGAAAACCAAGGGCCGCGAGTTCCTGCTGGTTTTCGGCGTAAGCGCCTTCATGATCTTCGGCGG CACCATGTGCGGTCTTGAAGAAGAGGCCGTTGCGTTCTACCCGATTCTGGCTCCGATATTCATCGCGTTGGGGTACGACT CCATCGTGACTGTTGGCGCCATCTTCATGGCCGGCTCCATCGGTACCACCTTCTCCACGGTCAACCCGTTCTCCGCCGTC ATCGCATCCAATGCCGCCGGCATCGTGTTCACCGAGGGCATGCCCATCCGCATTCTCGGTTTGATCATCGGCTCGATTGT GTATTTGCTCTACCTGCATTGGTACTCCAAGAAGGTGAAGGAGAATCCCGAGTTCAGCTACGCATATAAGGACCAGGACG AGTTCAAGTCGCTGTGGGCCATGGACACCGAAGCCGATACCGGCTCTTTCGATCTGCGCCACAAGCTGATTCTGGTGATT TTCGTTTCGGCATTCATCATCATGATCATCGGCGTTATGGCTCTCGGCTGGTGGTTCCCCCAGATGGCGGCCGAGTTCAT CACGCTCTCCATCCTGTGCATGTTCATTGGCGGCACTGGCAAGAACGGCCTGGGCGAGGCGCGCATGGTCGATGCGTTCT CCGACGGCGCAAGCAGCATGGTTGCCGTGTCCTTGATCATCGGTCTTGCCCGCGGCATCAATCACGTGCTGAACCAGGGT CTCATCAGCGACACCATTCTGTACAGCGCTTCCAACCTGGTCATGGGTATGAGCGGTCCTGCGTTCATCATCGTGCTCAT CCTGGTGTTCTTCGTACTGGGCTTCGTGGTGCCTTCGTCGAGCGGCCTGGCCGTGCTGTCCATGCCCATTTTCGCGCCCT TGGCCGACACGGTGGGCATCCCGCGCTGGATCATCGTCTGCGCATATCAATGGGGCCAGTACGCCATGCTCTACATCGCG CCGACCGGCCTGATCATGGCTACGTTGCAGATGCTCCACATGAAGATGAGCGACTGGTTCAAGTTCGTGTGGCCCATGAT GCTGTTCACGCTGGTGTTCGGATCCATTCTTCTGTCCATCTGCACGATCGTGTACGCGGTCTAA Protein sequence : MSETVATMDSVGVAEEPKKKKHTFTFPSAFTVLFIVTIIAVACTYLIPAGQYSKLIYAADSNVLQITDPAGEVTELEATQ DTLDELGVKIEIEQFTSGAITKPISIPGTYESLEQNPVSFLDIPYSMVVGIIDGVDVMVFILCLGGLIGVVRATGAFESG LGALTRKTKGREFLLVFGVSAFMIFGGTMCGLEEEAVAFYPILAPIFIALGYDSIVTVGAIFMAGSIGTTFSTVNPFSAV IASNAAGIVFTEGMPIRILGLIIGSIVYLLYLHWYSKKVKENPEFSYAYKDQDEFKSLWAMDTEADTGSFDLRHKLILVI FVSAFIIMIIGVMALGWWFPQMAAEFITLSILCMFIGGTGKNGLGEARMVDAFSDGASSMVAVSLIIGLARGINHVLNQG LISDTILYSASNLVMGMSGPAFIIVLILVFFVLGFVVPSSSGLAVLSMPIFAPLADTVGIPRWIIVCAYQWGQYAMLYIA PTGLIMATLQMLHMKMSDWFKFVWPMMLFTLVFGSILLSICTIVYAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAV1171 | NP_371695.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-136 | 62 |
| SA1014 | NP_374287.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-136 | 62 |
| SACOL1183 | YP_186046.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 1e-136 | 62 |
| SAUSA300_1064 | YP_493762.1 | TRAP family protein | Not tested | vSa¥ã | Protein | 1e-136 | 62 |
| SAKOR_01092 | YP_008491280.1 | Arginine/ornithine antiporter | Not tested | vSa¥ã | Protein | 7e-137 | 62 |
| MW1052 | NP_645869.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-137 | 62 |
