Gene Information

Name : Shel_07160 (Shel_07160)
Accession : YP_003143123.1
Strain : Slackia heliotrinireducens DSM 20476
Genome accession: NC_013165
Putative virulence/resistance : Unknown
Product : S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0809
EC number : -
Position : 829431 - 830516 bp
Length : 1086 bp
Strand : +
Note : PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase

DNA sequence :
ATGAGAACCGATGATTTCGACTACGAACTGCCGCCTGAGCGCATCGCGCAGGAGCCTTGGCCCGTGCGCGACGAGTGCAG
ACTTTTGGTGATGGACCGCAAGACCGGCGAGGTGACCGATCGCATATTCCGCGACGTGGCGGAATACCTGCAGCCGGGCG
ACGTGCTGGTTGCCAACGAGACCCGCGTGCTGCCGGCGCGCCTTTTGGGCTCGAAGCGGGGGACCGGCGGGGCCTGCGAA
GTCTTCCTGCTTCGTGAGCGCTTCGACGTGGAGCCGAAAACCACCCACACGGCCGTGTGGGACGTGCTGGTGCGTCCCGG
TCGCAGGTTGAAACCAGGTACCGGCGCCATGGTGGACTTCGAAGGGCCCGATGGGAACGTGGTGCTTTCGGCCGAAATCA
TCGACTGGGGGTCGGACACGGGCAAGGGCGAACGCATCGCGCGCCTGAGCACGCCGTTGGATTCCTTCGACGAGGCCCTG
CACGCCGCGGGCCACACTCCGCTGCCGCCCTATATCAAAGGATACGCCGGCGACGAGGAGATGTACCAGACGGTGTACTC
CCAGGCGGAGACCAGCGCCGCAGCGCCGACCGCCGGACTGCACTTCACGCCGGAGCTGATTGGGAGCCTGAAGGCCAAGG
GCGTCGAGTGGCACACCGTGGAGCTGCAGGTGGGTCTGGACACGTTCCGCGTGGTGGACGAGGACGACCCGGCGCAGCAC
GCCATGCACACCGAGTTCTACAGCGTGCCCCAAAGCGTTGTGGATGCCTGCGACGCAGCCCATGCCCGCGGCAACCGCGT
GTTCGCCGTGGGAACCACCAGCGTGCGGTCCCTGGAAAGCGCGTTCGACCGCGAATCGGGAAAACTCCGAGCCCGCGACC
ACGAAGCCACCTGCCTGTTCATCCTGCCAGGCTACACCTTCGGCGTGGTGGACGGCCTGATCACCAATTTCCACGTGCCC
CGCAGCACGCTCATGATGCTGGTCAGCGCGTTTTCGACGCGCGAGAACATCATGGCCGCATACAAGCACGCCATAGACAG
CGAATACCGCATGCTGAGCTTCGGCGACGCCATGCTTATCTGCTAG

Protein sequence :
MRTDDFDYELPPERIAQEPWPVRDECRLLVMDRKTGEVTDRIFRDVAEYLQPGDVLVANETRVLPARLLGSKRGTGGACE
VFLLRERFDVEPKTTHTAVWDVLVRPGRRLKPGTGAMVDFEGPDGNVVLSAEIIDWGSDTGKGERIARLSTPLDSFDEAL
HAAGHTPLPPYIKGYAGDEEMYQTVYSQAETSAAAPTAGLHFTPELIGSLKAKGVEWHTVELQVGLDTFRVVDEDDPAQH
AMHTEFYSVPQSVVDACDAAHARGNRVFAVGTTSVRSLESAFDRESGKLRARDHEATCLFILPGYTFGVVDGLITNFHVP
RSTLMMLVSAFSTRENIMAAYKHAIDSEYRMLSFGDAMLIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
queA AAT96122.1 QueA Not tested T-PAI Protein 1e-53 45
queA AAF71483.1 QueA Not tested Hrp PAI Protein 4e-54 45
queA AAF71490.1 QueA Not tested Hrp PAI Protein 6e-50 45
queA AAT96070.1 QueA Not tested T-PAI Protein 5e-50 45
queA AAT96042.1 QueA Not tested T-PAI Protein 5e-50 45
queA AAT96106.1 QueA Not tested T-PAI Protein 3e-50 45
queA AAT96182.1 QueA Not tested T-PAI Protein 2e-48 44