Gene Information

Name : Shel_07100 (Shel_07100)
Accession : YP_003143117.1
Strain : Slackia heliotrinireducens DSM 20476
Genome accession: NC_013165
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : -
Position : 824425 - 825096 bp
Length : 672 bp
Strand : +
Note : PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit

DNA sequence :
ATGTTCACTGGCATCGTTGAGGAGATGGGAACGGTTCGGCGCGTCCTGCCCGGCGCCCGAGCGGGCAAAATCACCATCGG
AGCGTCCAAGGTGCTCGGCGGCACGCAGATCGGCGACAGCATCGCCGTCAACGGCGTGTGCCTGACTGTGGTGGAGATGG
GCGCCGACAGCTTCGTGGCCGACGTCATGCCCGAAACCCTGTCCAAATCGGGGCTCGGCCAGCTCAAAACCGGGGACAAA
GTGAACCTGGAGCGGGCCATGGCCGCTGACGGGAGGTTCGGCGGGCATATCGTGTCGGGCCACATCGACGGCACGGGCCG
CATTGCGGAGATGCGTCCCGATCAGAATGCGGTGCGGGTGCGCATCTCTGCGCCGGCCGGCATTCTCGCCCTCATTGTGG
AGAAGGGGTCCATTGCGATCGACGGCATCAGCCTGACGGTTGCTTCGGTGTCCGCCACCGACTTCCAGGTGTCTCTCATT
CCCCATACCGGGGAGGAGACGACCCTGCTCAAGAAGCGCGCAGGGGACATCGTCAACCTGGAAAACGATGTGGTGGGCAA
GTACGTGCAGAAGCTGTTGGGAAGCGCTTTGGGCAAGCCGGCGGAGCAGGCTCCGTTGCAAGAAGCGTCTTCCGGCATGA
CCGTCGAGTTCCTCCAAAAATACGGGTTCTAA

Protein sequence :
MFTGIVEEMGTVRRVLPGARAGKITIGASKVLGGTQIGDSIAVNGVCLTVVEMGADSFVADVMPETLSKSGLGQLKTGDK
VNLERAMAADGRFGGHIVSGHIDGTGRIAEMRPDQNAVRVRISAPAGILALIVEKGSIAIDGISLTVASVSATDFQVSLI
PHTGEETTLLKKRAGDIVNLENDVVGKYVQKLLGSALGKPAEQAPLQEASSGMTVEFLQKYGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 3e-40 41
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 3e-40 41