Gene Information

Name : Shel_05770 (Shel_05770)
Accession : YP_003142985.1
Strain : Slackia heliotrinireducens DSM 20476
Genome accession: NC_013165
Putative virulence/resistance : Virulence
Product : multidrug ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 674319 - 675218 bp
Length : 900 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGGAAGCGAGCATTGCAACCCATGGTTTGACAAAGGCCTATGGGGACGTGGAAGTCGTCAGCGGGCTGGACATGGTGGT
GCCCGCAGGATCGGTGTACGGTTTTCTGGGGCCGAACGGCGCAGGAAAAACCACCACGATGAAGATGCTGCTGGGGCTTG
TGCACGCCTCATCGGGCACATCCACGGTGTTGGGGGAAACGGTTTCCGAAAAGACCCGCACGAAGCTGAACGCCCGGATC
GGGTCGCTTATCGAAAACCCCAGCTGCTATCCGCACCTTACCGCGCGGGAGAACCTCGAAATCGTCCGCAGCCTGCGGGG
GCTTCCCGAATCGGCCATCGACGAGGCGCTTGCCACCGTTCATCTTACGGGCACGGGCACCAAGCCGGTGCGCGCGTTCA
GCTTAGGCATGCGGCAACGCCTAGGCCTGGCCACGGCTCTCATGGGGCGGCCCGAGTTGCTGCTTCTGGACGAACCCACC
AACGGGCTCGACCCTGCGGGCATCCAGGAGATTCGCGAACTCATACGCGCGCTGCCCGGCGAATACGGATGCACCGTGCT
GGTGTCGAGCCATCTGCTTTCGGAAATCGACCAGATGAGCGACCATGTGGGCATCATCTCGCGCGGCCGCATGGTGTGGC
AGGGTCCTATGGGCAACCTGCACGCCCAGGCGCGCCGATGGCTGTCGCTGCGCACGACCGACAACGAGCGCGCGGCGCAA
TTGCTGGGCGCTTCGTACGGCAACGAGGGTTGGCTCAATGTGGTGGCGGCCGACGATGATCTTGTCGCCTGGATGACGTT
GTTGCTGGCTGCGCATGGCATCGCCGTTTTGCGTCTTGAGGAGCGCCGCGAAGACCTGGAGGACATCTTCCTGCAGCTGA
CGGGGAAGGGGGCGCTGTAA

Protein sequence :
MEASIATHGLTKAYGDVEVVSGLDMVVPAGSVYGFLGPNGAGKTTTMKMLLGLVHASSGTSTVLGETVSEKTRTKLNARI
GSLIENPSCYPHLTARENLEIVRSLRGLPESAIDEALATVHLTGTGTKPVRAFSLGMRQRLGLATALMGRPELLLLDEPT
NGLDPAGIQEIRELIRALPGEYGCTVLVSSHLLSEIDQMSDHVGIISRGRMVWQGPMGNLHAQARRWLSLRTTDNERAAQ
LLGASYGNEGWLNVVAADDDLVAWMTLLLAAHGIAVLRLEERREDLEDIFLQLTGKGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 3e-63 49
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 5e-41 45
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 5e-41 45
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 4e-30 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 4e-30 44
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 4e-30 44
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 4e-30 44
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 8e-36 44