Gene Information

Name : Shel_05270 (Shel_05270)
Accession : YP_003142935.1
Strain : Slackia heliotrinireducens DSM 20476
Genome accession: NC_013165
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 613287 - 613493 bp
Length : 207 bp
Strand : +
Note : PFAM: Helix-turn-helix

DNA sequence :
ATGGACGACAAATTGGTTCTCAAAAACCGGTTGAAGGAAATCCGCGCCGAGCAGAAGTTGTCGCAAGCGCAGCTCGCCGC
AATGGTGGGCGTTTCCCGCAACACCATTAGCTCCATCGAAACGGGCCAGTTCAACCCCACAGCGAAGCTTGCCTTGGTCC
TATGCATTGCCTTGGACAAGAAGTTCGAAGACATCTTCTACTTCTAG

Protein sequence :
MDDKLVLKNRLKEIRAEQKLSQAQLAAMVGVSRNTISSIETGQFNPTAKLALVLCIALDKKFEDIFYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-07 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-07 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shel_05270 YP_003142935.1 transcriptional regulator VFG2175 Protein 8e-08 50
Shel_05270 YP_003142935.1 transcriptional regulator VFG2168 Protein 8e-08 50