Gene Information

Name : Shel_03230 (Shel_03230)
Accession : YP_003142739.1
Strain : Slackia heliotrinireducens DSM 20476
Genome accession: NC_013165
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 392732 - 393361 bp
Length : 630 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
GTGCGGCGCATCATGCGCGAGGAGGGCCTCACGCCCGTCTGGGCCGGGGGGAAGCGGGCCCCGTGGAGCTCGTACGCCGG
CGAGCCCACGCCGGCGCCGCCCAACCTGGCCGCGCGCAACTTCCGCTCGGCGCTGCCGAACTTCCTGTGGGTCACCGACA
TCACCGAGTTCCGCATCCCGGCCGGCAAGTGCTACCTGTCGGCCGTGCGCGACTGCTTCGACTCGTCGATCTTGGCCTGG
CGCGTCGGGCCCCACCCCACGGCCGACCTGGCCAACGCCTCGCTGGCGGACGCCTGCGCGCTGCTCGCCCCCGGCGAGGC
GCCCGTGGTCCACTCCGACCGCGGCGGCCACTACCGCTGGCCGGGCTGGATCGCGATCTGCGAGGAGTTCGGGCTGGTCA
GGAGCATGTCGGCCAAGGGCTGCAGCCCCGACAACGCGGCCATGGAGGGCTTCTTCGGCCTGCTCAAGCGCGAGTTCTTC
CACGGGCGCGACTGGCGCGGCTGGAGCCTGGTCGAGTTCATGGACGCGCTCGACTGGTGGATCGTGGGGTACAATGAGGA
GAGGCAGTGCTCGACGCTGGGCCACATGACGCCCGCGGAGTTCCGCCGCACGCTGGGAAGGGCCGCATAG

Protein sequence :
MRRIMREEGLTPVWAGGKRAPWSSYAGEPTPAPPNLAARNFRSALPNFLWVTDITEFRIPAGKCYLSAVRDCFDSSILAW
RVGPHPTADLANASLADACALLAPGEAPVVHSDRGGHYRWPGWIAICEEFGLVRSMSAKGCSPDNAAMEGFFGLLKREFF
HGRDWRGWSLVEFMDALDWWIVGYNEERQCSTLGHMTPAEFRRTLGRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0051 YP_005124320.1 transposase-like protein Not tested Not named Protein 2e-36 44