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Name : Shel_26270 (Shel_26270) Accession : YP_003144979.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2901248 - 2902534 bp Length : 1287 bp Strand : - Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGCTGGACATCAAGTTCGTTCGTGAAAACCAAGACGTCATTACCCAGGCCATGAAGAACCGCAACGGTTCCTGGGACGT CGATAAGTTCAATGAGCTGGACGAATCCCGCCGTTCATACATCGCCGACGAAGAGGCCATGCAGGCGAAGCGCAACACCG CGTCCAAGCAGATCGGCGCGCTGATGCGCGAAGGCAAGGCGGACGAGGCCGAAGCCTCCAAGGAAGAGGTCCGTGCGCTG AACGAGAAGATCGCCGAGGTGTCCGCGAAGCGTTCCGAAGCCGAAACCGCCCTGAACGAGATGCTGTGCCGCATCCCCAA TATTCCGCATGAGTCCACGCCCGTCGGCAAGGATGAAACCGAGAACCCCGAGGTCCGTCGCTGGGGCACTCCCCGCAAGT TCGACTTTGAATTCAAGGCCCACTGGGATCTGGGTGCCGACCTCAACATCATCGACAGCGAGCGCGCCACCAAACTGGCC GGCTCCCGCTTCGTGCTGCTGGGCGGCCTGGGCGCCCGTCTGGAGCGCGCGCTGATCAACTTCATGGCTGACACGCACGG TTCCCGCGGCTACAAGGAATGGTGGTGCCCGGTCATGGCGAACGGGAACACCCTGTACGGTACGGGCCAGCTGCCTAAGT TCGAAGAAGACCTGTTCCACACCACCGAGGGCCTGTACCTCATCCCCACGGCCGAGGTCCAGCTCACCAATATCCACGCC GGCGACGTGCTCGAGGCAAGCCAGCTGCCGCTGAAGTACTGCGGCTACACCGCCTGCTTCCGCGAGGAGGCCGGCAGCGC CGGGCGCGACACCCGCGGCCTGATTCGCGTACACCAGTTCGACAAGGTCGAAATGGTCAAATTCGCCACCCCCGAGGATG GCTTCAACCAGCTCGAGCTCATGGTCGAAGACGCGGAGAACATCCTGCAGCTGCTGGGTCTGCCTTATCGCGTCATCTCG CTGTGCACCGGCGACCTGGGATTCTCCGCCGCCAAGACCTATGACTTGGAAGTGTGGCTGCCCAGCTACGACGCCTACAA GGAGATCAGCTCCTGCTCCTGCTGCACCGACTTCCAGGCACGCCGCGCCAACATCAGGTACCGCGACCCCAACAAGTTCA AGGGCACGCGTTACGTCTACACGCTCAACGGCTCCGGCTTGGCTGTGGGCCGTACGATGGCTGCCGTCATGGAGAACTAC CAGCAGGCCGACGGCTCCATCAAGGTGCCCGACGTGCTGGTTCCCTACATGGGCGGCGTCGAAGTCATCGCTGCTGACCA GCTGTAA Protein sequence : MLDIKFVRENQDVITQAMKNRNGSWDVDKFNELDESRRSYIADEEAMQAKRNTASKQIGALMREGKADEAEASKEEVRAL NEKIAEVSAKRSEAETALNEMLCRIPNIPHESTPVGKDETENPEVRRWGTPRKFDFEFKAHWDLGADLNIIDSERATKLA GSRFVLLGGLGARLERALINFMADTHGSRGYKEWWCPVMANGNTLYGTGQLPKFEEDLFHTTEGLYLIPTAEVQLTNIHA GDVLEASQLPLKYCGYTACFREEAGSAGRDTRGLIRVHQFDKVEMVKFATPEDGFNQLELMVEDAENILQLLGLPYRVIS LCTGDLGFSAAKTYDLEVWLPSYDAYKEISSCSCCTDFQARRANIRYRDPNKFKGTRYVYTLNGSGLAVGRTMAAVMENY QQADGSIKVPDVLVPYMGGVEVIAADQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-100 | 53 |
