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Name : Shel_26110 (Shel_26110) Accession : YP_003144964.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Resistance Product : multidrug ABC transporter ATPase and permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2879906 - 2881762 bp Length : 1857 bp Strand : + Note : PFAM: ABC transporter; ABC transporter transmembrane region DNA sequence : ATGGCAGATACAGTCAAAAAGAAGAGCGATCTTGGCGTATTGCTCGAATATGCGGGAAGGCGCCGCGGGCTTACCTACTT GGGGCTCGCCCTTTCCGCAATTTCCATGGTGCTGAGCATGGCACCCTACATCTGCATTTGGTTGGCGGTGCGCGATCTTA TCGCCGTGGCTCCAAACTGGAGCAATGCAAGCAGCGTCAGCCTGTATGGATGGGCGGCTTTCGCCTTCGCGGTCGCAGGC ATCATCGTGTACTTCGCAGCGCTCATGTGCACACACCTGGCAGCGTTCCGCACCGCGTCTAATATCCGCAAGCGGGGCAT GGCGCATCTGATGCGCACGCCGCTTGGCTATTTCGACAACAACGCGAGCGGCCTCATCCGCAACCGTCTGGATGGCGCTT CGGCCGAAACCGAAACGCTGCTGGCACACAACCTTGCCGACATCGTTGGCACGGTCGCCATGCTCGTCAGCGTGATTGCG ATCATGTTCGTGTTCGACTGGCGCATGGGTCTGGCATGCCTGCTCGCAGCGGTCATCTCGATCATCTCCATGTTCGCGAT GATGGGTGGCAAGAACGCCGACCTCATACGGGAATACCAGGCCGCTCAGGACCGCATGAGCAAGGCAGGCACCGAATACG TGCGCGGCATTCCCGTTGTAAAGGTGTTCCAGCAGACGGTGAACTCGTTCAAGGCCTTCAAAGAGGCCATCGACGACTAC AGCGAAAAAGCCAGCAACTATCAGGGGAAGGTGTGCCGCATCCCCCAGGCGGTGAACCTCACCTTCACCGAAGGCGCTTT CGTGTTCTTGGTGCCGGTAGCGCTGTTTCTGGCGCCCGGCGCCCTTGCTTCGAACGACTTCGCAGGTTTCGTGACAGATT TCGCATTCTACGCAGTGTTTTCCGCCATCATCTCCACCGCGTTGGCGAAAATCATGTTCGCAACCAGCGGCATGATGCTG GCGAGCACGGCTCTCAGGCGCATCGAGTATGTGATGGATGCCCCCACGCTTAAGGTTTCCGCAGATCCAGCCGTCCCGCA GAGCAACCGCGTCGAGTTCAAGAACGTTTCCTTCACGTATGAAGGAGCCGCCGAACCCGCACTGAAGAACGTGTCATTTG TGGCCGAATCAGGACAGACCGTTGCCCTGGTAGGCCCAAGCGGCGGCGGCAAGACGACGGCGGCCAGCCTTGTCCCCCGC TTCTGGGACGTTACGTCCGGCAGCGTAGAGGTTGGCGGCGTAGACGTGCGCGCCATGGATCCGCACGTGCTTATGGACCA AATCGCATTCGTCTTCCAGAACAACCACCTGTTCAAGACCTCCATCTCGGAAAACGTTCGAGCCGCTCGCCCCGAAGCCG CGCGCGAAGAAGTGATTGCGGCGCATTCCGCCGCGCAGTGCGACGACATCATCGCGAAGCTGCCCGACGGAATAGACACG AAGATCGGCACGGAGGGCACCTACCTTTCCGGAGGCGAGCAGCAGCGCATCGCGCTTGCGCGCGCCCTCCTGAAAGACGC GCCGATCGTCGTACTCGACGAAGCGACCGCCTTTGCCGACCCTGAAAACGAGATGCTCATCCAAAAAGCATTCGCAAAGC TTGCGCAGGGACGCACGGTCATCATGATTGCGCACCGCCTTTCCACGGTGGTGAACGCCGACCAGATTGTCGTCCTCGAC TCGGGAAAAGCCGTCGAAAAGGGAACGCACGAGGAGCTTGTGGCTGCAGGCGGCCTGTACGCCCGCATGTGGAACGACTA CAACAAAGCCGCCACATGGCGCATCGCCGGCGCAGCGCAAATCCCACAATCCGACCCCAAACGACCCGAGCCCCTGGCCG GAATCGAGGTGATGTAG Protein sequence : MADTVKKKSDLGVLLEYAGRRRGLTYLGLALSAISMVLSMAPYICIWLAVRDLIAVAPNWSNASSVSLYGWAAFAFAVAG IIVYFAALMCTHLAAFRTASNIRKRGMAHLMRTPLGYFDNNASGLIRNRLDGASAETETLLAHNLADIVGTVAMLVSVIA IMFVFDWRMGLACLLAAVISIISMFAMMGGKNADLIREYQAAQDRMSKAGTEYVRGIPVVKVFQQTVNSFKAFKEAIDDY SEKASNYQGKVCRIPQAVNLTFTEGAFVFLVPVALFLAPGALASNDFAGFVTDFAFYAVFSAIISTALAKIMFATSGMML ASTALRRIEYVMDAPTLKVSADPAVPQSNRVEFKNVSFTYEGAAEPALKNVSFVAESGQTVALVGPSGGGKTTAASLVPR FWDVTSGSVEVGGVDVRAMDPHVLMDQIAFVFQNNHLFKTSISENVRAARPEAAREEVIAAHSAAQCDDIIAKLPDGIDT KIGTEGTYLSGGEQQRIALARALLKDAPIVVLDEATAFADPENEMLIQKAFAKLAQGRTVIMIAHRLSTVVNADQIVVLD SGKAVEKGTHEELVAAGGLYARMWNDYNKAATWRIAGAAQIPQSDPKRPEPLAGIEVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-105 | 41 |
