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Name : Shel_19490 (Shel_19490) Accession : YP_003144314.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2184152 - 2185651 bp Length : 1500 bp Strand : - Note : PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGACTGAAGAAAACATCCAGCCCGAAGCAATCGAGGACGATCCCATCGAGGTTCGCCTCAACAAGCGTCAGGCGCTTAT CGACGCAGGGAAGAACCCCTACGGTTCTCGCTTTGACTACACGCATCACGTGGCCGAACTGGAAGAGAAGTACGCAGATC TGGAAGACGGGGCAGTCACCGAAGACGTGGTAAAGGTGGCCGGCCGCATCATGGCCATCCGCAATCAGGGCAAGATTGCC TTCGTCGTCGTGCGTGACGCCACGGCAGACATCCAGCTGTTCTGCCGCATCAACGTGTTGGGCGAAGAGGCCTACGAAGA GGTCAAGAACCTCGATGTGGGCGATTGGGTCGGTGCCGAAGGCACCGTCATCCGCACGCGTCGCGGCCAGCTATCTGTGT CGCCTACCGAGGTGCGTCTGCTCTCCAAGAGCATCCGTCCGCTGCCTGAGAAATTCCACGGCCTGGCGGATAAGGAAACC CGCTACCGCCAGCGTTATGTCGACCTGGTCATGAACCCCGACGTGCGCGAGACCTTCGAGAAGCGCTTCAAGATTCTGGC GGCCATTCGCCGTTATATGGAAGGCCAGGGCTTCTATGCTGTGGAAACCCCCATGCTGCATTCCATCATGGGCGGTGCCA ACGCCAAGCCCTTCGTGACCCACCACAACGCCCTTGACATCGACTTCTACCTGCGCATCGCCACGGAGCTTCCGCTGAAG CGCCTGCTGGTGGGCGGTTTCGAGCGCGTCTACGAGATGGGCCGCATCTTCCGCAACGAAGGCATGGACCCGTACCACAA CCCCGAGTTCACCACCATCGAGGCGTATCAGGCCTATTCCGACCTGGACGGCATGAAAGAGCTTACCCAAGGCATGATTC AGTTTGCCGCGCAGGAGGCATGCGGTACGCTGCAGATCGAATACCAGGGTCAGGCTGTCGACCTCTCCGGTGAATGGGAG AGCCGCACCATGTGTGACCTGGCCACCGAATATGCCGGGGAGGAAGTCAGCTTCGATCGCACCCGTGAGGAGCTGGCCGC CATCGCTGAACGCGGCGGGGCCCATGTGGAAGACGCCTGGGGCAAGGGCAAGATCATTTCCGAGATCTTCGAAGCCTACG TCGAGGACCATCTGATCCAGCCCATCTTCGTCACAGAGCATCCGCTGGAAATCTCCCCGTTGGCCAGCAAGCTGCCTGAC AACCCCGAGCTGACCGCCCGCTTCGAGCTGTTCATCTGCGGACATGAGTACGCCAATGCGTTCACCGAGCTCAACGACCC GGTGGACCAGCGCGAACGTTTCGCCGCCCAGATGCAGGCCAAGGTCCAGGGTGACGAGGAGGCCATGGGCTACGACGAGG ACTACATCCGAGCGCTTGAATACGGCATGCCGCCGGCAGGCGGCGTGGGATTGGGCATTGACCGATTGGTCATGTTGCTC ACGGATTCCGCGACCATCCGCGACGTCCTGTTGTTCCCGCATATGCGCCCCGAGGCATAG Protein sequence : MTEENIQPEAIEDDPIEVRLNKRQALIDAGKNPYGSRFDYTHHVAELEEKYADLEDGAVTEDVVKVAGRIMAIRNQGKIA FVVVRDATADIQLFCRINVLGEEAYEEVKNLDVGDWVGAEGTVIRTRRGQLSVSPTEVRLLSKSIRPLPEKFHGLADKET RYRQRYVDLVMNPDVRETFEKRFKILAAIRRYMEGQGFYAVETPMLHSIMGGANAKPFVTHHNALDIDFYLRIATELPLK RLLVGGFERVYEMGRIFRNEGMDPYHNPEFTTIEAYQAYSDLDGMKELTQGMIQFAAQEACGTLQIEYQGQAVDLSGEWE SRTMCDLATEYAGEEVSFDRTREELAAIAERGGAHVEDAWGKGKIISEIFEAYVEDHLIQPIFVTEHPLEISPLASKLPD NPELTARFELFICGHEYANAFTELNDPVDQRERFAAQMQAKVQGDEEAMGYDEDYIRALEYGMPPAGGVGLGIDRLVMLL TDSATIRDVLLFPHMRPEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-111 | 50 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-89 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shel_19490 | YP_003144314.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-111 | 50 |
