|
Name : Shel_19480 (Shel_19480) Accession : YP_003144313.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Virulence Product : chaperone ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2181282 - 2183879 bp Length : 2598 bp Strand : - Note : PFAM: C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA) DNA sequence : ATGCCATTGGAGAAATTCACTGAGAGGGCACGCCACGTCCTCGCTTTGGCACAGGAGGAGGCTCGCAGCTTCGACACGCC TTGCGTGGGCAGCGAATACCTCATCCTGGGTCTTGCGAAGGAGACCGAAGGCATGGCTTCTCAGGCGTTGTCGCAGGTGG GGGTGACTTACGACAAGGCCCGCGACGTGGTTGCCGAGATGAAGAAAGGCGAAGCGTCCGATCAGTCTGCCGACCAGGCG GAAAGCGGTACCACGCACCTCTATTTCTCTCCTCGTGTGAAGCGCATTCTTGAGCAGGCGCTGCGCGAAGCGCTGCAGAT GGGGCAGGGCCTCATTTCCACCGAGCACCTTTTGCTCGGCGTTATCCGCGAAGGCGAGGGCGGTGCCGTCGACGTGCTTA AGCGCATGGACGTCAACCTCGATGACCTGCGAGCGGCGCTCAACGATCTGGTGGGTAAGCCATCGCCTGTGGCTTCGGGC ATGCCGTTCTTCGGCACGGGTGAGTCGGCCAACGAATCCAGCATGTTGGACGAATTCGGCACCGACCTGACCGCCAAAGC CAAGAAGGGCCTGCTCGACCCGGTCATCGGTCGTTCTGCCGAGATCGAGCGCGTTTTGCAGGTGCTGTCGCGCCGCCAGA AGAACAACCCGCTGCTCATCGGCGAGCCCGGCGTAGGCAAGACCGCAGTGGTCGAAGGCCTTGCCGAACTTGTGGTTGCC GGCCAGGTGCCTGACATCATCGCCGACAAGCGCATCATCACGCTGGACGTGTCCGCTCTGGTTGCGGGCTCCAAATACCG CGGCGAGTTCGAGGAGCGCCTGAAGAAGGTCATCAAAGAGGTCATCAAGTCCAAGGACGTCATCCTGTTCATCGACGAGA TGCACACCATCATCGGCGCTGGTTCTGCAGAGGGCTCCATCGACGCTGCCGCTATTTTGAAGCCGCCGCTGTCCCGCGGC GAGATTCAGGTCATCGGCGCAACCACTATCGAGGAGTACCGCAAGCACCTCGAGAAGGATTCCGCGCTGGAGCGTCGTTT CCAGACCGTCATGGTCAACGAGCCCACCGAGGAGCAGACCATCCGCATTCTCGAGGGTCTGCGCGACCGGTACGAGGCAC ACCACCACGTCCACTTCACGGATGAGGCGCTGCACGCTGCCGTCACCATGTCCATGCGCTATGTCCAGGACCGCTTCCTG CCCGATAAGGCCATCGACGTGCTGGACGAGGCCGGCGCCCGCGCGCGCATTCGCAACCGCACGCTGCCTGACGAGGTCCG CGAGCTCGACGACGAAATCCGCAAGGTCCGCAACGACCGCGAGTCCGCCGTCAGCAAGCAGGAGTACGAGGAGGCTGCAC GCCTGCGCGACAAGGAGAAGGAGCTTCAGGAGAAGCGCGAAGAGGTCATGAAGAAGGCCGCTGAAGAGGCCGACCGTACC ATCACCGAGGTGGGCGAGAAGGATATCGCCGATATCATCAGCATGTCCACGGGCGTTCCTGTCAGCAACCTGACCGAGGC CGAAACCTCCAAGCTGCTGCGTATGGAAGAAGTGCTTCACGAGCGCATCATCGGTCAGGACGAGGCCGTCACGGCCCTGT CCAAGGCCATCCGCCGCAGCCGTAGCGGACTTAAGGACCCCCGCCGTCCCGCCGGATCGTTCATCTTCCTGGGCCCCTCG GGCGTGGGCAAGACCGAACTGTCCAAGGCGCTGGCCGAGTTCCTGTTCAACTCCGAAGAGGCGCTCGTGTCCTTCGACAT GTCGGAATACATGGAGAAGCACTCCGTCAGCCGTCTGGTGGGTTCGCCTCCGGGCTACGTGGGCTTCGACGAGGGCGGCC AGCTTACCAAGGCTGTGCGTCAGCGCCCGTACTCGGTGCTGCTGTTCGACGAAATCGAGAAGGCGCATCCGGACGTGTTC AACATCCTGCTGCAGATTCTCGAAGAGGGTCGCTTGACGGACTCCCAGGGTCGTTCTGTGGACTTCCGCAACACAATCGT CATCATGACGTCCAACGTGGGTGCCCGCGACATCGCCCAGACCGCGCCTTTGGGATTCGCTCCCGAATCGCAGAAGGGCC TGTCCGACAAGGAAATCAACAGCCGAGTCATGTCCGAGCTGAAGAAGCTGTTCCGTCCTGAGTTCCTCAACCGTCTGGAC GAGATCATCGTCTTCAAGAGCCTGACGCCCGAGCAGATTCTGCAGATTGTCGACCTCATGGTGGCCGACCTGCGCGACCG CCTGATCGAGCAGGATATGACCATCAACCTGACGCCTGCGGCGTCCAAGTTCATCGCCGACGAAGGCACCGACGTGGCCA TGGGCGCCCGTCCGCTGCGTCGCGCCATCCAGCGCTTGCTGGAGGACCCGATTTCGGAGCAGATTCTGGACGGCACCTGG AAGGCCGGTTCGGTCATCGACGTTGACGTGAAGGACGACGAGCTGGTGTTCACCGCCGGCGAAGGCGTCATTCCCGAGAA GCGCAAGCGCGACAGCATCGCCCGCGAAGCGGATTCGTTGCTGCCGGAATTCGACTTGTCGCATGCCGGTGTTGCGCCTA AGGGCGGCTCCGGCGACGGAGCGGGCGCTGCGGACTAA Protein sequence : MPLEKFTERARHVLALAQEEARSFDTPCVGSEYLILGLAKETEGMASQALSQVGVTYDKARDVVAEMKKGEASDQSADQA ESGTTHLYFSPRVKRILEQALREALQMGQGLISTEHLLLGVIREGEGGAVDVLKRMDVNLDDLRAALNDLVGKPSPVASG MPFFGTGESANESSMLDEFGTDLTAKAKKGLLDPVIGRSAEIERVLQVLSRRQKNNPLLIGEPGVGKTAVVEGLAELVVA GQVPDIIADKRIITLDVSALVAGSKYRGEFEERLKKVIKEVIKSKDVILFIDEMHTIIGAGSAEGSIDAAAILKPPLSRG EIQVIGATTIEEYRKHLEKDSALERRFQTVMVNEPTEEQTIRILEGLRDRYEAHHHVHFTDEALHAAVTMSMRYVQDRFL PDKAIDVLDEAGARARIRNRTLPDEVRELDDEIRKVRNDRESAVSKQEYEEAARLRDKEKELQEKREEVMKKAAEEADRT ITEVGEKDIADIISMSTGVPVSNLTEAETSKLLRMEEVLHERIIGQDEAVTALSKAIRRSRSGLKDPRRPAGSFIFLGPS GVGKTELSKALAEFLFNSEEALVSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVLLFDEIEKAHPDVF NILLQILEEGRLTDSQGRSVDFRNTIVIMTSNVGARDIAQTAPLGFAPESQKGLSDKEINSRVMSELKKLFRPEFLNRLD EIIVFKSLTPEQILQIVDLMVADLRDRLIEQDMTINLTPAASKFIADEGTDVAMGARPLRRAIQRLLEDPISEQILDGTW KAGSVIDVDVKDDELVFTAGEGVIPEKRKRDSIAREADSLLPEFDLSHAGVAPKGGSGDGAGAAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shel_19480 | YP_003144313.1 | chaperone ATPase | VFG0079 | Protein | 0.0 | 53 |
| Shel_19480 | YP_003144313.1 | chaperone ATPase | VFG0080 | Protein | 8e-156 | 52 |
| Shel_19480 | YP_003144313.1 | chaperone ATPase | VFG2084 | Protein | 5e-89 | 41 |
