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Name : Shel_17670 (Shel_17670) Accession : YP_003144135.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Unknown Product : type I restriction-modification system methyltransferase subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 1994102 - 1995613 bp Length : 1512 bp Strand : - Note : PFAM: N-6 DNA Methylase; TIGRFAM: type I restriction system adenine methylase (hsdM) DNA sequence : GTGGCACGCAAGAAGGCAGACAACACCGCGGAGATCGGCTTCGAGCAGCAGATATGGTCTGCCGCCGACAAGCTGCGCGG CAACATGGACGCGTCCGAGTACAAGAACGTCGTGCTGGGGCTGATCTTCCTCAAGTACATCTCAGACAAGTTCGAGCAGC GCTACCAGGAGCTGGTCGACGAGGGCGAGGGCTTCGAGGAGGACCGCGACGAGTACACCTACAAGAACATCTTCTTCGTG CCCCCAGAGGCCAGGTGGGGCGTGATCGCCGGCGCCGCCCACACGCCCGAGATCGGCAAGGCAATCGACAACGCCATGCG CCTCATCGAGGCGGAGAACGACAAGCTCAAGAACATCCTGCCCAAGAACTTCGCGCGACAGGAGCTTGACAAGCGCAGGC TCGGCGAGGTCGTGGACCTGTTCACCAACGTGCAGATGGCCGAGAAGGGCGACACCCGCGACATCCTGGGCCGCACCTAC GAGTACTGCCTCTCCAAGTTCGCCGAGGCCGAGGGCAAGAACGCGGGAGAGTTCTACACGCCCGCCTGCGTCGTGCGCAC GCTGGTCGAGATCATCGAGCCGTACCGCGGCCGCGTATACGACCCGTGCTGCGGGTCCGGCGGCATGTTCGTGCAGTCGG CCCAGTTCGTGAAGAACCACCAGGGCAGGATCGACGACCTGTCCGTGTACGGCCAGGAATCCAACCCGACCACATGGAAG ATGGCGATGATGAACCTCGCCATCCGGGGCATCGACGCGGACCTGGGCACCTTCAACGCCGACACTTTCTTCAACGACAT CCACAAGAACGAGCGCTTCGACTTCGTGCTGGCGAACCCGCCGTTCAACATGAGCGACTGGGGCGGCGAGCAGCTGAAGG AGGACCCGCGCTGGGACTTCGGCACGCCTCCTGCAGGCAACGCCAACTTCGCCTGGATGCAGCATATGATCCACCACCTG GCCGACGACGGGCGCATGGGCATGGTGCTCGCGAACGGCTCGCTTTCTTCGCAAACGAACAACGAGGGTGCTATCAGGCA GAAGATCGTGGATGCAGGCCTGGTTGAAGGCATCGTGGCCATGCCGGACCGCCTCTTCTACAGTACGGGCATCCCCGTGA GCCTGTGGATCATCAGCAAGGAATCGAACCGACAGCGCAGGACACTCTTCGTGGACGCCCGCGAGATGGGCACGATGGTG AGTCGCCGTCTGCGCGAGTTCACAGACGAGGACATAGCAAAGGTCGCCGAAACTTTCGATGCCTTCCGCAAAGGTGAGCT TGAGGACGAGAAGGGCTTCTGCGCCGCCGTCGACATCGAGGACATCGCCAAGCAGGACTACATCCTCACACCCGGCCGCT ACGTTGGCATAAAGGACGAAGAAGACGACGGCGAGCCCTTCGAGGAGAAGATGGAGCGCCTGACCGGTGAGCTTGCCAAG TGTTTTGATGAGTCTAACCGGCTGCAGCAGCAGATTCGCAAGAACTTGGAGGCTATCGGCTATGGGTTCTAA Protein sequence : MARKKADNTAEIGFEQQIWSAADKLRGNMDASEYKNVVLGLIFLKYISDKFEQRYQELVDEGEGFEEDRDEYTYKNIFFV PPEARWGVIAGAAHTPEIGKAIDNAMRLIEAENDKLKNILPKNFARQELDKRRLGEVVDLFTNVQMAEKGDTRDILGRTY EYCLSKFAEAEGKNAGEFYTPACVVRTLVEIIEPYRGRVYDPCCGSGGMFVQSAQFVKNHQGRIDDLSVYGQESNPTTWK MAMMNLAIRGIDADLGTFNADTFFNDIHKNERFDFVLANPPFNMSDWGGEQLKEDPRWDFGTPPAGNANFAWMQHMIHHL ADDGRMGMVLANGSLSSQTNNEGAIRQKIVDAGLVEGIVAMPDRLFYSTGIPVSLWIISKESNRQRRTLFVDAREMGTMV SRRLREFTDEDIAKVAETFDAFRKGELEDEKGFCAAVDIEDIAKQDYILTPGRYVGIKDEEDDGEPFEEKMERLTGELAK CFDESNRLQQQIRKNLEAIGYGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 7e-146 | 60 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 4e-145 | 59 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-145 | 59 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 5e-111 | 47 |
