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Name : Shel_16560 (Shel_16560) Accession : YP_003144024.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Unknown Product : bifunctional HTH-domain containing protein/aminotransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0436 EC number : - Position : 1862832 - 1864349 bp Length : 1518 bp Strand : - Note : in Corynebacterium glutamicum the aminotransferase can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; this protein contains a helix-turn-helix domain at the N-terminus DNA sequence : ATGGCAAGCACGACTTTTGCGGAGCGGCTGAAGCGGTCCATGGCTGAACAAGGCCTTAAGCAGGCGGATTTGCTGCGATT GGCTGCGGCGGCAGAGCAAAAACTAGGGAAAAGCCAGCTCAGCCAGTATGTGAGCGGCAAAACCATACCGCGACGCGATA CGTTGCACTTCTTGGCAGACGCGCTGCACGTCAATCCCGATTGGCTGTTGAACGGCGCAGCTGCACAAACTCAAGCCATT GAAGCTCCCGCGCCTGTTTCTGAAATTGAACTTTCCAAACCTATCTCTTCGGAAGGAAGACCCATGCGTACTTTCAAAAA ATCCTCCAAGCTCGATAACGTGCTGTACGACGTCCGCGGTCCTGTGGTCGACGAGGCCATGCGCATGGAGCAGGACGGCG TCAACGTGTTGAAATTGAACATCGGCAACCCGGCGCCCTTCGGATTCCGCACGCCCGACGAAGTAGTCTACGACATGGCC CACCAGCTTACGGAGTGCGAAGGCTACTCCGACAGCAGGGGATTGTTCAGCGCCCGCAAGGCCATCATGCAGTACTCGCA GATCAAGGGCCTTCCCAACGTCACTATGGACGACATCTACACAGGCAACGGCGTCAGCGAGCTTATCAATATATGTATGT CGGCGCTGCTGGATTCCGGAGACGAGATTCTCATCCCGTCTCCCGACTATCCGCTTTGGACCGCATGCGCAACGCTGGCA GGCGGCAAGCCCGTGCATTACATTTGCGACGAAGAAGCCAACTGGTATCCCGACCTCGACGACATGCGCTCCAAAGTGAC CGACCGCACCAAAGCCATCGTCATCATCAACCCGAACAACCCCACCGGCGTCCTCTACCCGCCGGAGATCTTGCAGGGCA TCATCGACATCGCCCGCGAGCATCAGCTCATGATCTTCTCCGATGAAATCTACGACCGCCTGGTGATGGACGGTAAGGAG CACATCAGCATCGCGTCCATGTGCCCCGACCTGTTCTGCGTCACCTTCAGCGGCCTGTCCAAGAGCCACATGATTGCCGG CTACCGCATCGGCTGGATGGTCCTTTCCGGCAACAAACGCCTGGCCAAGGATTACATCCTGGGCCTTAACATGCTTTCCA ACATGCGCTTGTGCTCCAACGTGCCTGCCCAATCCATCGTTCAGACCGCGCTGTGGGGCCATCAGAGCGTCAAAGGTTAC GTCACGCCGGGCGGCCGCATCTACGAGCAGCGTGAATACGTGTACAACGCGCTCAAGGACATCCCGGGCATCAGCGTGGT GAAGCCCGACGCGGCGTTCTACATCTTCCCGAAGATCGATGTGAAGAAGTTCAACATTACCGACGACGTCCAGTTCGCAT TGGATCTGCTCAAGGACAAGAAGATCCTCGTTGTGCAGGGCTCCGGTTTCAATTGGAAGGAACCGGACCACTTCCGCGTG GTGTACCTGCCGCGCATCGAGGTCCTCTCCGAGTGCATGACCAAGCTGGCGGACTTCCTGAGCTACTACCGCCAGTAG Protein sequence : MASTTFAERLKRSMAEQGLKQADLLRLAAAAEQKLGKSQLSQYVSGKTIPRRDTLHFLADALHVNPDWLLNGAAAQTQAI EAPAPVSEIELSKPISSEGRPMRTFKKSSKLDNVLYDVRGPVVDEAMRMEQDGVNVLKLNIGNPAPFGFRTPDEVVYDMA HQLTECEGYSDSRGLFSARKAIMQYSQIKGLPNVTMDDIYTGNGVSELINICMSALLDSGDEILIPSPDYPLWTACATLA GGKPVHYICDEEANWYPDLDDMRSKVTDRTKAIVIINPNNPTGVLYPPEILQGIIDIAREHQLMIFSDEIYDRLVMDGKE HISIASMCPDLFCVTFSGLSKSHMIAGYRIGWMVLSGNKRLAKDYILGLNMLSNMRLCSNVPAQSIVQTALWGHQSVKGY VTPGGRIYEQREYVYNALKDIPGISVVKPDAAFYIFPKIDVKKFNITDDVQFALDLLKDKKILVVQGSGFNWKEPDHFRV VYLPRIEVLSECMTKLADFLSYYRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aspC | YP_005682179.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 2e-112 | 57 |
| aspC | YP_005684271.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 2e-112 | 57 |
| aspC | YP_003784329.1 | aspartate aminotransferase | Not tested | PiCp 7 | Protein | 2e-112 | 57 |
| aspC | YP_005686363.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 2e-112 | 57 |
