Gene Information

Name : Shel_16050 (Shel_16050)
Accession : YP_003143973.1
Strain : Slackia heliotrinireducens DSM 20476
Genome accession: NC_013165
Putative virulence/resistance : Unknown
Product : aspartate semialdehyde dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0136
EC number : 1.2.1.11
Position : 1802865 - 1803878 bp
Length : 1014 bp
Strand : -
Note : PFAM: Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

DNA sequence :
ATGCGTAAGTACAACGTTGCAATCCTCGGCGCCACCGGCGTGGTCGGCCAGCAGATGCTGAAGTGCCTGGACGAACAGGA
TTTTCCGGTAGGAAACATCAAGCTTCTTGCCAGCGCCCGCAGCGCCGGCAAGACCGTTAAGTTCCAGGACACGGACATCG
CCATCGAGGAGGCCCGTGACGAGGCCTTCGATGGCGTGGACATCGTGCTGGGCGCCGCCGAGAACGACATCGCGCAGCGT
TTCATCCCCGTGGCCCGCGAGAAGGGCTGCGTGACGGTGGACAATTCCAGCGCCTACCGCCTGGACCCCGATGTGCCGCT
GGTGGTTCCCGAGATCAACCCCGAGGATATCGCCAAGCACAAGGGCATCATCGCCAACCCCAACTGCGCGACCATCATCG
GCCTGGTGCCGGTGTTCCCGCTGCATAAGGCCGCAGGCGTCAAGCGCATCATCGCCTCCACCTATCAGGCTGCCTCCGGC
GCCGGCATCAACGGTCTGCGCGAGCTTGAGGACCAGATAGGCCGCTTCGGCCGCGGCGAGGAGATGTCCGACCCCAAGGC
CTTCGCCTACCAGCTGGCCTTCAACCTGATTCCGCAGATCGGCGGCTTCGACGAGAATGGCTACACTTCCGAAGAGATGA
AGATGCAGAACGAGGGCCGCAAGATCATGCACGTCCCCGAGCTGCGCGTGAACTGCACCTGCATTCGCGTTCCGGTCATG
CGCTCCCACTCCGAGAGCATCACCATCGAGCTCGAGAATAAGCTGACTCCCGACGAGGCCCGCGCCATTCTGGCCACCGC
GCCTGGCGTCAAGCTGGTCGACGACCCGGCTGCCCAGCAGTATCCCATGCCGCTGGACACCACCGACCAGGACCTCATCT
TCGTCGGCCGCATCCGCGAGGACATCTCCGCAGCCGATGGCACCTACGGACTGACGCTGTGGTGCGCAGGCGACCAGATC
CGCAAGGGCGCCGCGACCAACGCCGTCCAGATTGCGAAGCTGCTCACCGTGTAG

Protein sequence :
MRKYNVAILGATGVVGQQMLKCLDEQDFPVGNIKLLASARSAGKTVKFQDTDIAIEEARDEAFDGVDIVLGAAENDIAQR
FIPVAREKGCVTVDNSSAYRLDPDVPLVVPEINPEDIAKHKGIIANPNCATIIGLVPVFPLHKAAGVKRIIASTYQAASG
AGINGLRELEDQIGRFGRGEEMSDPKAFAYQLAFNLIPQIGGFDENGYTSEEMKMQNEGRKIMHVPELRVNCTCIRVPVM
RSHSESITIELENKLTPDEARAILATAPGVKLVDDPAAQQYPMPLDTTDQDLIFVGRIREDISAADGTYGLTLWCAGDQI
RKGAATNAVQIAKLLTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0195 YP_005126708.1 aspartate-semialdehyde dehydrogenase Not tested Not named Protein 3e-51 42