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Name : Shel_13760 (Shel_13760) Accession : YP_003143746.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Virulence Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1573160 - 1573837 bp Length : 678 bp Strand : + Note : PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain DNA sequence : ATGCGAGTATTGATTGTTGAAGACGATCCGAACATCGCCGAATACCTACGCAAAAGCCTGGAGTCGGAAGGCTTTACGAC CGATGTGGCGTATGACGGTCCGACCGGCTTCGACATGGCACTCGCAAACCCCTACGACGCCATAACACTCGACATTATCC TTCCTGGTAAAAACGGGTATACGGTGTGCAAAGAGCTTCGCGATTCCGGTGTCACCACCCCGATCCTCATGCTAACGGCC AAAGACGGTGAATACGACGAGGCCGATGCCTTCGATACGGGTGCAGACGACTTCCTTCGCAAACCGTTTTCCCTGGTCGT ATTGCTTGCACGGCTGCGGGCGCTGGTCCGTCGCGGCGGCGTAGCCAAAGGATCGGTTCTTAAGGCTTCCGACTTAATGC TAGATACACGCACGAAACGCGTCACCAGAGCAGGAAGGGAAATCGAGCTTACGCCACGCGAATTCGCTTTGCTTGAGCTG CTTTTGATGAACGCCGGCAACGCCCTACCCAAACAACTGCTGCTCGAACGCGTATGGGGCTACGCCATACTTGCAGATGA GAACGTAGTCGAGGTATACATCAGCTACCTCCGCAGGAAGGTGGACGCGCCCTTCGACAAGAAGCTCATCCGAACCGTGC GCGGCGTAGGCTATTGCATAGACAAGGACCCGGAATGA Protein sequence : MRVLIVEDDPNIAEYLRKSLESEGFTTDVAYDGPTGFDMALANPYDAITLDIILPGKNGYTVCKELRDSGVTTPILMLTA KDGEYDEADAFDTGADDFLRKPFSLVVLLARLRALVRRGGVAKGSVLKASDLMLDTRTKRVTRAGREIELTPREFALLEL LLMNAGNALPKQLLLERVWGYAILADENVVEVYISYLRRKVDAPFDKKLIRTVRGVGYCIDKDPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 2e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0125 | Protein | 6e-40 | 47 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0197 | Protein | 3e-36 | 45 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_003923.1003417.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_013450.8614146.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002951.3238224.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007793.3914065.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002758.1121390.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_010079.5776364.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002952.2859858.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007622.3794948.p0 | Protein | 3e-35 | 44 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE015929.1.gene1106. | Protein | 6e-31 | 43 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0083 | Protein | 3e-36 | 43 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | Y16952.3.orf35.gene. | Protein | 7e-26 | 42 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | HE999704.1.gene1528. | Protein | 2e-35 | 42 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0347 | Protein | 2e-33 | 41 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0111 | Protein | 4e-36 | 41 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0308 | Protein | 3e-34 | 41 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0638 | Protein | 1e-28 | 41 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE000516.2.gene3505. | Protein | 5e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1390 | Protein | 1e-39 | 45 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG0596 | Protein | 7e-32 | 41 |
| Shel_13760 | YP_003143746.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1386 | Protein | 2e-32 | 41 |
