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Name : Apre_1822 (Apre_1822) Accession : YP_003142397.1 Strain : Genome accession: NC_013164 Putative virulence/resistance : Unknown Product : DNA topoisomerase type IA central domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 79893 - 81614 bp Length : 1722 bp Strand : + Note : PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; KEGG: bcy:Bcer98_0358 DNA topoisomerase III DNA sequence : ATGAAATTAGTAATAGCAGAAAAACCAAGTGTAGCAGTTACAATTGCAAAAGTAATTGGAGCAAGAACAAGAAAAAACGG ATATTATGAGGGAGGTGGATACATTGTTTCTTGGTGTGTTGGTCATTTAATTCAAATGGCAAGTCCAGATAAGATAGACG AAAAATGGAAGAAATGGACAATAGAAAATCTTCCAATAATCCCAGAAGAATATATTTATGAAGTATCTAAAAGCACTAAA AAGCAATATGGAGTTTTAAAGAAGCTTTTAAACGATAAGAACATCGACACAGTAATAAATGCTTGTGATGCTGGAAGAGA GGGAGAACTTATTTTTAGGCTTGTATATAATCAAGCTAAATGTAAGAAGAAAATTCAAAGACTTTGGATATCTTCAATGG AAAACAAAGCTATTGAAGATGGCTTTAGAAATCTTAAAGACGGAGAAAACTTTGAAGACTTATATAGATCGGCAAGTGCA AGAGCAATTGTGGATTGGCTGGTAGGAATGAATTTAAGTAGGCTTTATTCTTGCATTTACAAGGAAACATATTCAGTCGG TAGAGTACAAACTCCAACTCTATATTTAATAGCTAAAAGGGATAGTGAAATAAACCTGTTTAAGAAGCAAAAATATTATA CAGTTGACCTATCTTATGGAGGATTAAAACTTGTATCAGATAGGATTGATAAAATTGAAGTTGCAGAGCAACTTTTAAAC TTGCTAGAAGATGAAATAGTTATTACAGAGGTAGAAGATAAAGAAATAAGCACAAGACCAGATAAACCTTATGATCTCAC TACCTTACAAAGAGAAGCAAACAAATATTTTGGATATTCAGCAAATGACACTTTAAACCTGGCACAAGGCTTGTATGAAA AAAAGCTAATCACATATCCAAGAACAGATAGTAGGCATTTAACCGATGATATGGTTAATACTATGAAAGAATTATTAGAA GGATTTGAAGAAGATTTTAAAATCAACGAATCAAACTTTAAGTCTATTTTTAATTCATCTAAGGTTACAGACCACTATGC GATTATTCCTACTATATCAGGCATTGGAAAAGCCAAAGATTTATCTGATAAAGAAAGCAAAATCTATAATCTAATTAAGA ATAAATTACTTGCTTCATGTTCGGATAATTTAAAGGAATCTAGCAGAAAAATCAGATATGAATATGATAAATTTAACTTC AATGCAAGTGGCAAGACTGTAATCGATGAGGGTTATACCAAGTATCTAAAGCCTTATGGAAAGGAAAGACAAGAAAATGA ATTACCAGATGTAAAGACTGGAGATAAAATTAAGCTAACTTCTAAAAATATATCGGAGAAATTTACCAAAGCTCCAAGTC ATTATAATGAAGATACACTTTTAAAGGCTATGGAGAATGCAGGGATTAAATCGCTGGATAAAGACATAGAAGTAGAAAGA AAAGGCTTAGGAACACCAGCTACAAGAGCAGGAATTATTGAAAATCTTATCCATAAGGATCTTATAAGAAGAGATAAGAA AAAATTACTTGTAACAGAAAAAGGCAATAGACTTGTATCGATTGTAGAGGATAAGTTTAAATCAGCTGAAACAACATCTG AATGGGAAATGAAACTTGCAAAGATAAGCTCAGGCGAAGTAGATAAAGAAGACTTTTTAAGAGAAATTGAAGATAGTATA AGGGAGCTTGTAGACAGGTACAAGAATAATCTAAATGAATAA Protein sequence : MKLVIAEKPSVAVTIAKVIGARTRKNGYYEGGGYIVSWCVGHLIQMASPDKIDEKWKKWTIENLPIIPEEYIYEVSKSTK KQYGVLKKLLNDKNIDTVINACDAGREGELIFRLVYNQAKCKKKIQRLWISSMENKAIEDGFRNLKDGENFEDLYRSASA RAIVDWLVGMNLSRLYSCIYKETYSVGRVQTPTLYLIAKRDSEINLFKKQKYYTVDLSYGGLKLVSDRIDKIEVAEQLLN LLEDEIVITEVEDKEISTRPDKPYDLTTLQREANKYFGYSANDTLNLAQGLYEKKLITYPRTDSRHLTDDMVNTMKELLE GFEEDFKINESNFKSIFNSSKVTDHYAIIPTISGIGKAKDLSDKESKIYNLIKNKLLASCSDNLKESSRKIRYEYDKFNF NASGKTVIDEGYTKYLKPYGKERQENELPDVKTGDKIKLTSKNISEKFTKAPSHYNEDTLLKAMENAGIKSLDKDIEVER KGLGTPATRAGIIENLIHKDLIRRDKKKLLVTEKGNRLVSIVEDKFKSAETTSEWEMKLAKISSGEVDKEDFLREIEDSI RELVDRYKNNLNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00720 | YP_008394244.1 | DNA topoisomerase III | Not tested | Not named | Protein | 9e-109 | 44 |
| topB-2 | NP_815968.1 | DNA topoisomerase III | Not tested | Not named | Protein | 1e-112 | 43 |
