Gene Information

Name : Apre_1815 (Apre_1815)
Accession : YP_003142390.1
Strain :
Genome accession: NC_013164
Putative virulence/resistance : Virulence
Product : putative type IV secretory pathway VirB4 protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 70611 - 72854 bp
Length : 2244 bp
Strand : +
Note : KEGG: bca:BCE_A0025 hypothetical protein

DNA sequence :
ATGTTACCAGAGGGCATTTGCCAGTTAGATGAAAAAAATTATTCAAAGACAATTTCATTTCAAGATATAAATTACCAGTT
GGCATTGGAAGAAGATAGAGATTTAATCTTTAATCAATTTGCCAACTTTTTAAATTCTTTTGATCCAAGTGTCCACATTG
AACTTTCATATGTAAATCAATTAGGAAGAAATAGAGACCTACAAGATGCAATTAAAATTGCTGATAAGGGAGACTTCTAT
GACGATGTAAGAAAAGAGTTTAGGGAGATGTTAAAGCTTCAACTTGCAAAGGGCAATAACGGACTTAAAAAGATGAAGTA
TATAACCTTTACCACAGAAGCCGATAACTTAGAGCAAGCAAGAGCAAAGTTAAATAGACTTGAAGTAGATATTTTATCTA
ACTTTAAATCTATGGGAGTAAGAGCAGAGAGCCTTGATGGCGAAGAAAGACTAAGACTTGTTCACGATATGTTAAATCCA
GACAAAAACTTTGATTTTTCATATAAGGATTTGAAGAAGAAAGAGTCTACAAAGTCACATATAACTCCCAATATCTTTAA
TTTTGCACCAGCAAATAATTTTAAATTTGGCAAATTCATTGGAGCAGTAAGCCATTTTCAAATACTTGCAAGTGAGCTAT
CAGACAGAATGTTATCTGAGTTTTTAGATATTGATGACAATATTTATGTAGCTTTTCATATAGATGTAGTTGAACAAGCA
GAAGCTATTAAACTCATTAAAAGAAAAAACACAGACCTAGACAGAATGAAAATCGAAGAACAAAAGAAAGCAGTTCGTGC
TGGATATGATATGGATATTATCCCTTCAGATATAAATACTTTTGGGGCTGATGTTAAGTCCATGTTATCTGACTTACAAA
ATAGAGATGAAAGGCTCTTTGTAGTTACCATAGTAATGATGAATTTTGCTAGGACTAATCAAAAATTAGAAAATACCATT
GCTCAAATATCATCAATTGCTAACAGACATAATTGTCAGGTAAAAAGATTATCTCATCAGCAAGAGCAAGGACTTGTTTC
TGTCTTACCTTTAGGAGTTAATCAAGTCGAGATAAAAAGATTTTTAACTTCATCATCAACGGCAGTATTTATGCCTTTTA
CAACAGAAGAGCTATTTATTGATTCGGCAAATTCTTTGTACTATGGCTTAAATGCCCTTAGCCAAAACTTGATTATGGCA
GATAGGAAGAAACTAAAGAACCCTAACGGATTAATATTAGGAACACCAGGTTCTGGTAAATCTTTCTCGGCAAAGAGAGA
GATGGCAAATGCAATTCTTGTAACAGACGATGATGTAATTATTTGTGATCCTGAGGGCGAGTATTCAAACCTTGTAAAAC
AATTTAATGGAGAAGTTATTAAAGTTTCAGCAAAGTCAAAGGACTACCTAAATCCACTTGATATTAATATGAACTATGGA
GATGGGGACGCACCTTTAAAGGATAAGGCAAACTTCATAATGTCTATGCTTGAACTTGTAGTAGGAGGATCTGGTCTTAC
TGCTGCAGAAAAATCTGTTATAGATAGGTGCTTACCAAAGATATATCAAAAATATTTTGAAGACCCCAAACCAGAAAATA
TGCCTATATTAGGAGATTTATACGATATGCTCCTATCTCAAGAAGAAGGAGTTGGTAGAAAGCTCGCAACAGAAATGGAA
ATTTATGTTAAGGGAAGTCTTAATGTATTTAATAATAGGTCAAATGTTGACTTAAATAGACAACTGCTCTGTTTTGATAT
AAAAGAGCTGGGAACACAACTTAAAAAAATAGGTATGCTTGTAATTCAAGACCAAGTTTGGAACAAGGTTTCCCTAAATA
GAGGAAGCAAGTCTACAAGATACTATATAGATGAGTTCCACCTTTTATTAAAAGACCCACAAACTGCTTCATATTCAGTA
GAAATCTGGAAAAGATTTAGAAAATGGGGCGGTATTCCAACAGGTATAACTCAAAACGTAAAAGACCTTTTAACAAGTCA
GGAAATTGAAAATATCTTTGATAATACAGACTTTGTTCTAATGTTAAATCAAGCATCTGGAGATAGAGATATTCTTGCTA
AAAAATTAAAAATATCGCCTTATCAGTTAAACTATATTACTAACTCAAATGCAGGTGAGGGACTATTATTCTTTGGAAAT
ACCATTGTTCCATTTATTGATAAATTCCCTAAAGACACCATGCTATATAAGCTAATGACAACAAAACCAGAAGAAGCTAA
GTAG

Protein sequence :
MLPEGICQLDEKNYSKTISFQDINYQLALEEDRDLIFNQFANFLNSFDPSVHIELSYVNQLGRNRDLQDAIKIADKGDFY
DDVRKEFREMLKLQLAKGNNGLKKMKYITFTTEADNLEQARAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNP
DKNFDFSYKDLKKKESTKSHITPNIFNFAPANNFKFGKFIGAVSHFQILASELSDRMLSEFLDIDDNIYVAFHIDVVEQA
EAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKSMLSDLQNRDERLFVVTIVMMNFARTNQKLENTI
AQISSIANRHNCQVKRLSHQQEQGLVSVLPLGVNQVEIKRFLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMA
DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKDYLNPLDINMNYG
DGDAPLKDKANFIMSMLELVVGGSGLTAAEKSVIDRCLPKIYQKYFEDPKPENMPILGDLYDMLLSQEEGVGRKLATEME
IYVKGSLNVFNNRSNVDLNRQLLCFDIKELGTQLKKIGMLVIQDQVWNKVSLNRGSKSTRYYIDEFHLLLKDPQTASYSV
EIWKRFRKWGGIPTGITQNVKDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNYITNSNAGEGLLFFGN
TIVPFIDKFPKDTMLYKLMTTKPEEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2320 NP_815976.1 traE protein Not tested Not named Protein 0.0 60
EFAU085_00716 YP_008394240.1 Type IV secretory pathway, VirB4 component Virulence Not named Protein 0.0 54