Gene Information

Name : Coch_0906 (Coch_0906)
Accession : YP_003141022.1
Strain : Capnocytophaga ochracea DSM 7271
Genome accession: NC_013162
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1055991 - 1056716 bp
Length : 726 bp
Strand : -
Note : PFAM: alanine racemase domain protein; KEGG: tde:TDE2315 hypothetical protein

DNA sequence : 
ATGGAAAATATATTACAAAACATCGCCTTAGTACAACAACGTATTGCCAACACTTGTGAGCGCGTAGGTCGCAAGCCGGA
GGAAGTAAAGCTCCTCTTGGCTACTAAAACGGTAACTCCTGAGCGCATCAAAGTAGCATTAAATGCAGGATATACGCTCA
TCGCCGAAAACAAAGTGCAAGAACTCAAGGAGAAGTATGAAGCGCTGAAAGACACTCCACATACCAATCATTTTATCGGT
CATTTACAAACGAATAAGATAAAAGATATTTTGCGTTACGAGGTGAGTTGTGTAGAATCGGTAGACCGCCTCGATTTAGC
CCAAAAACTCCACAACCGTTTGGAGAGTGAAGGTAAAGAACTCGATATCTTTATTCAGGTGAATACCTCTAACGAAGAAA
GCAAGTTTGGTGCCGACCCCTCTGAGGTACTAAATCTTGTAAAGCAAGTGGCTACACTGCCTACCCTACATATCAAAGGA
CTGATGACTATCGGTCTGTTTAGTGCCGAAACCGAAAAGGTGCGCGCCTGCTTTAAACTCCTTAAACATCTCCAACAAGA
GATTATTGCTCTCAACCTCCCTAATGTAGACCCCCGAGAACTCTCAATGGGAATGAGTGGCGACCTCGAAACCGCTATTG
AAGAAGGTGCCACTATCGTGCGCGTTGGTACCGCTATCTTCGGTAAGCGCATCTACCCCGATAGCTACTATTGGAATGAA
AAGTGA

Protein sequence : 
MENILQNIALVQQRIANTCERVGRKPEEVKLLLATKTVTPERIKVALNAGYTLIAENKVQELKEKYEALKDTPHTNHFIG
HLQTNKIKDILRYEVSCVESVDRLDLAQKLHNRLESEGKELDIFIQVNTSNEESKFGADPSEVLNLVKQVATLPTLHIKG
LMTIGLFSAETEKVRACFKLLKHLQQEIIALNLPNVDPRELSMGMSGDLETAIEEGATIVRVGTAIFGKRIYPDSYYWNE
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 7e-31 43
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 7e-31 43
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 7e-31 43
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 7e-31 43