Gene Information

Name : Coch_0346 (Coch_0346)
Accession : YP_003140470.1
Strain : Capnocytophaga ochracea DSM 7271
Genome accession: NC_013162
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 433200 - 433697 bp
Length : 498 bp
Strand : +
Note : PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cts:Ctha_2551 redoxin domain protein

DNA sequence :
ATGGCAAATATTACGTTTCACGAACAACCAGCTCATACTGTTGGAGAACTTCCCAAAGTGGGTACTATAGCTCCTAATTT
TTCAGCTGTAAGGAATGATTTAGCTGAAGTAACACTCAAAGACTTTCAAGGGAAGAAAGTTGTACTAAATATTTTTCCGA
GTGTAGATACGGGGGTATGTGCAGCTTCTGTACGCAAATTTCACGTGGAAGCTTCTAAACTCAGTAATGTAGCTATCCTT
TGTGTATCTAAAGACCTTCCTTTTGCACTTACTCGCTTTTGCGCTGCTGAAGGAATAGACAATCTCACTATGCTTTCAGA
CTTTAGAGGTGATTTTGCAAAGCATTACCCTATTGTCTTTACTGATACTCCCTTAAAAGGGTTATTATCACGTTGTGTAA
TAGTTTTAGATGAGCAAGGGAAAGTGGTTTATACAGAACAAGTAGCTGAAACCACACACGAACCTAACTACGTTAAAGCG
TTAGAGGCTTTGAAATAG

Protein sequence :
MANITFHEQPAHTVGELPKVGTIAPNFSAVRNDLAEVTLKDFQGKKVVLNIFPSVDTGVCAASVRKFHVEASKLSNVAIL
CVSKDLPFALTRFCAAEGIDNLTMLSDFRGDFAKHYPIVFTDTPLKGLLSRCVIVLDEQGKVVYTEQVAETTHEPNYVKA
LEALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-29 41
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-29 41