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Name : Coch_0027 (Coch_0027) Accession : YP_003140154.1 Strain : Capnocytophaga ochracea DSM 7271 Genome accession: NC_013162 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 31848 - 32585 bp Length : 738 bp Strand : - Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: fjo:Fjoh_4513 3-deoxy-D-manno-octulosonate cytidylyltransferase DNA sequence : ATGAAACTGATAGCAATGATACCTGCCCGCTACGGAGCGACCCGCTTTCCTGCAAAGCTGATGCAAGACCTTTGTGGCAA GCCTGTAATTGTACATACTTATGAACGTGTAGCTGATACCCGCTTGTTTGACGAAGTGTATGTGGTAACTGATGATGACC GTATAGAAAAAGTGATACGGGAGGTAGGAGGCAAAGTAATTCGCAGTAAAAAAGAACACAATAGTGGCAGTGACCGTTTG GCAGAAGCTTCAAGAGATTTAGACGTAGATATTATTGTGAATGTACAAGGAGATGAGCCTTTTACAGATAAAGAGAACTT ACAAAAAGTAATTGATATTTTTGCTAAAGACCTTACTAAAAGCATAGCGGTAGCAAGCCTAATGGAGCGTATTATCGACC CAGATGATATTGCAAACCCAAACAATGTGAAGGTAGTAGTGAACAAATTTGGAGAGGCACTCTATTTTTCGAGGAATATC ATTCCCTTTCCTCGCGACCCTAACACCAAGGTGTCTTATTACAAGCACATAGGTATTTACGCCTATCGCAAAGAAGCATT ACAACAGTTCACCGAGTTACCTCCTTCCTTATTAGAAGAAACGGAAAAATTAGAACAGCTTCGTTACTTAGAAAATGGGT TTAAAATACGTTTAGCGCTAACCGATATTCCTACTATAGGGATTGATACCCCCGAAGATTTGGAGAGGGCACGTAAGCGA TTGATTACACAAAAGTGA Protein sequence : MKLIAMIPARYGATRFPAKLMQDLCGKPVIVHTYERVADTRLFDEVYVVTDDDRIEKVIREVGGKVIRSKKEHNSGSDRL AEASRDLDVDIIVNVQGDEPFTDKENLQKVIDIFAKDLTKSIAVASLMERIIDPDDIANPNNVKVVVNKFGEALYFSRNI IPFPRDPNTKVSYYKHIGIYAYRKEALQQFTELPPSLLEETEKLEQLRYLENGFKIRLALTDIPTIGIDTPEDLERARKR LITQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 5e-37 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-37 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 5e-36 | 42 |
