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Name : Coch_1859 (Coch_1859) Accession : YP_003141965.1 Strain : Capnocytophaga ochracea DSM 7271 Genome accession: NC_013162 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2222202 - 2224808 bp Length : 2607 bp Strand : - Note : KEGG: fps:FP1765 ATPase with chaperone activity ATP- binding subunit; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein DNA sequence : ATGAATTTTAATAACTTTACTATCAAAGCGCAAGAAGCGGTACAAACCGCTCAGCAAATAGCCCAGCAGTACGGGCACCA GGAATTGCAAAACGAACATTTCTTCAAAGCTATTGAGCAGGTAGATGAGAACGTATTGCCTTTCCTATTCAAAAAATTGA ATATCAACCGCGAGCAATTAAATAAACAATTAGAAACTGCTCTGCAAGGCTTTGCCAAAGTCAGCGGTGGCGATATGGGG CTCTCACGCGAAGCAAACACTATGCTCAACGAAGCCGCTAACATCGCTAAAAAATGGAATGACGAATATGTATCCTTAGA ACACCTTATATTGGCTATCTTCAAATCAAACAGTAAAATCGCCCAAGCCCTCAAAAACCAAGGCGTGAGTGAAAAAGAGT TGGAGAAAGCCATTCAAGAATTGCGCAAAGGCGAACGCGTAACTTCGGCTTCAGCTGAAGATACTTATAATTCGCTCAAC AAATACGCCAAAAACCTCAATCAGTTAGCTGATAGCGGGAAACTCGACCCTGTGATTGGTCGTGATGAGGAAATACGTCG TGTATTGCAAATTCTTTCACGCCGTACCAAGAACAACCCTATGTTGGTAGGTGAACCTGGGGTAGGTAAAACGGCTATAG CCGAAGGCTTAGCGCACCGTATTGTGAAAGGTGACGTACCTGAAAACCTAAAAGACAAGGTTATTTACTCTCTCGATATG GGTGCCCTTATCGCAGGTGCGAAGTACAAAGGTGAGTTTGAAGAACGACTCAAATCAGTAGTGAAAGAGGTTACCTCATC CGATGGCAATATCATTCTGTTTATAGATGAAATTCACACCCTTGTGGGAGCAGGAGGAGGCGAAGGTGCTATGGACGCTG CTAATATATTAAAACCTGCCTTAGCTCGTGGTGAACTCCGTGCCATTGGTGCCACTACTCTCGATGAGTACCAAAAGTAC TTTGAGAAAGACAAAGCTCTCGAACGTCGTTTTCAAAAGGTAATGGTAGATGAACCAGATACCGAAAGTGCAATTTCTAT CCTTCGGGGTATCAAAGAAAAGTACGAAACCCACCACAAAGTACGTATCAAAGACGAGGCGATTATCGCGGCAGTAGAAC TTTCTGAACGCTATATCACTAATCGTTTCTTACCCGATAAGGCAATAGACCTAATGGACGAGGCAGCTGCCAAGCTCCGT ATGGAAATCAATTCTAAACCCGAAGAGTTAGACGTACTCGACCGTAAGATAATGCAACTCGAAATAGAAATTGAGGCTAT CAAACGTGAAAAAGACGAAGATAAGCTCAAAATGCTATATGTAGATTTGGCAAATCTTAAAGAAGAACGTAACGCTATCA ATGCTAAATGGCAGAGTGAAAAAAGCGTAATTGATGAAGTACAAACCACTAAGGAAGCTATTGAGAAATACCGTTTGGAA GCCGATAGAGCTGAACGTGAAGGCGACTATGGTAAAGTAGCCGAATTGCGCTATGGAAAAATCAAAGAAGCGGAAGACAA GTTAGTGGAATTGCAAAAGAATTTAGACAGCAAATCACACGAAAATGCTCTTGTAAAAGAAGAAGTAACCGCCGAAGACA TCGCTGAAGTAGTAGCAAAATGGACTGGTATACCTGTAGCTAAAATGTTACAAGGCGAACGCGAAAAACTCTTAAACTTA GAGAAAGAATTGCACCGCCGTGTAGTAGGTCAAGAAGAAGCCATCGAGGCAGTTTCCGATGCCATACGCCGTAGTCGTGC TGGTTTGCAAGACCCACGTCGTCCTATAGGTTCATTCCTTTTCTTAGGAACTACGGGGGTAGGTAAAACCGAACTTGCCA AAGCCTTAGCCGAATATCTATTCGACGATGAAAATGCAATGACGCGTATCGATATGAGCGAATACCAAGAGAAACACGCT GTGAGCCGATTGGTAGGTGCGCCTCCAGGATATGTAGGATATGACGAAGGTGGTCAACTTACTGAAGCTGTGCGTCGCCG TCCGTATTCTGTAATCCTTTTGGATGAAATTGAAAAAGCTCACCCCGATACATTCAACATCTTGTTGCAAGTACTCGACG AAGGTCGTCTTACTGACAATAAAGGTCGTACTGCCGACTTTAAGAATACGATTATCATTATGACCTCTAATATGGGTAGC CATATCATTCAGGAAACTTTTGAAAAATATCCTAAGGATACCGAGCGCGCTATCGACGAGTCACGTGACGAGGTGTTACA ACTCCTCAAACAAACTGTACGCCCTGAGTTTTTGAACCGTATAGACGACATTATAATGTTCACACCGCTCAACGCCAAGG ATATCCGTAGCATTGTGCGTTTGCAATTGCAATCAGTGTTCCGTATGGTTGCCAAAGAAGGTATCTTGCTCGATGCTACC GATGAGGCTATTGATTACTTAGCACAAAAAGGTTTTGACCCTCAGTTTGGTGCTCGTCCAGTGAAACGTATCATTCAGAA AGAAGTGCTTAACAAGCTTTCTAAAGAAATTTTGAGTGGCACAGTACAACGCGATGCTGTCATCTTATTAGATGCTTTTG ATAACCAATTGGTATTTAGAAATCAAACATCAGAAGATAAAAAATAG Protein sequence : MNFNNFTIKAQEAVQTAQQIAQQYGHQELQNEHFFKAIEQVDENVLPFLFKKLNINREQLNKQLETALQGFAKVSGGDMG LSREANTMLNEAANIAKKWNDEYVSLEHLILAIFKSNSKIAQALKNQGVSEKELEKAIQELRKGERVTSASAEDTYNSLN KYAKNLNQLADSGKLDPVIGRDEEIRRVLQILSRRTKNNPMLVGEPGVGKTAIAEGLAHRIVKGDVPENLKDKVIYSLDM GALIAGAKYKGEFEERLKSVVKEVTSSDGNIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLDEYQKY FEKDKALERRFQKVMVDEPDTESAISILRGIKEKYETHHKVRIKDEAIIAAVELSERYITNRFLPDKAIDLMDEAAAKLR MEINSKPEELDVLDRKIMQLEIEIEAIKREKDEDKLKMLYVDLANLKEERNAINAKWQSEKSVIDEVQTTKEAIEKYRLE ADRAEREGDYGKVAELRYGKIKEAEDKLVELQKNLDSKSHENALVKEEVTAEDIAEVVAKWTGIPVAKMLQGEREKLLNL EKELHRRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQEKHA VSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS HIIQETFEKYPKDTERAIDESRDEVLQLLKQTVRPEFLNRIDDIIMFTPLNAKDIRSIVRLQLQSVFRMVAKEGILLDAT DEAIDYLAQKGFDPQFGARPVKRIIQKEVLNKLSKEILSGTVQRDAVILLDAFDNQLVFRNQTSEDKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-102 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-102 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Coch_1859 | YP_003141965.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 2e-109 | 42 |
