Gene Information

Name : Coch_1685 (Coch_1685)
Accession : YP_003141791.1
Strain : Capnocytophaga ochracea DSM 7271
Genome accession: NC_013162
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 2012101 - 2013237 bp
Length : 1137 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: cac:CAC0390 cystathionine gamma-synthase

DNA sequence : 
ATGAAGTTTGAAACTAAAGCCATTCACGGCGTAAGAACAGCCAATAAAAATACAGAAAACTGGGGAAGCACCATCAATAT
GGCTTCTACTTTCCCTATTGAAGAATACGGTGTAGAACAAGAGTTTGAATACGGACGCGTTTCAAATCCTACTCGTAAGG
ATTTTGAAAGTCTTATAGCTCAATTAGAAAGTGGCATACACGGATTCGGATTCTCATCGGGTATGGCTGCCATTTCTTCT
GTTTTTACAATGTTTAAAACAGGCGACCATTTTGTGTTAGGCTTAGATATCTACGGAGGTACTTATCGCATTATGCACGA
TATTTTCAATAAGTTTGGTTTTGAAGCTACTTTTGTCGATATGACCGACCTAACCAAAATAGAGAAAGCCATTCGCCCTA
ATACAAAAGCCATCTTTATAGAAACACCCTCCAACCCTCTGTTAGACGTTACCGATATATGCGGGGTAATAGAAATCGCC
AAGAAACATAATCTGCTCACTATGGTCGATAATACCTTTATGTCGCCCGTGTTACAACGCCCGTTAGAGTTAGGAGCCGA
CATAGTATTACACAGTGCTACCAAATATTTAGGAGGTCATAACGATATTATCGCAGGAGCAGTGGTGGTAAATGATGAAA
CCTTAGCCGAGAAAATACGTTTTGCACAAGTAGCCATAGGGGCATTGCTTTCTCCGTTTGATAGCTGGTTGCTCTTGCGC
AGTATGAAAACCCTAAAACTAAGAGTCGAAAAAGCACAAGCCAATACCCTTAAACTATTAAATTTCCTTAAAACGCACCC
CGAAGTAGAAAAGGTGTATTATCCTACTGATACACAAAATAAAGGGAAAGCAATACAAGAACGCCAAGCTTCTGGTGGAG
GTTCAGTATTTTCTTTTACAGTAAAAACCGAAGCCAAAGCCAAAAAGTTTTTCGAGAGTCTAAAAGTAGCCCTTTTTGCA
GTGAGCTTAGGAGGAGTCGAAACATTGGTAACCCACCCCAGTTCGCTTACTCACACTGAGTTTCCCGAAGAAGAAAAAGT
AGCACGAGGCGTTACCCGTACACTCATCCGCGTAGCAGTAGGAATTGAAGATGCTGACGACCTTATCGCCGATTTTAAAC
AAGCCTTAGAAAAATAA

Protein sequence : 
MKFETKAIHGVRTANKNTENWGSTINMASTFPIEEYGVEQEFEYGRVSNPTRKDFESLIAQLESGIHGFGFSSGMAAISS
VFTMFKTGDHFVLGLDIYGGTYRIMHDIFNKFGFEATFVDMTDLTKIEKAIRPNTKAIFIETPSNPLLDVTDICGVIEIA
KKHNLLTMVDNTFMSPVLQRPLELGADIVLHSATKYLGGHNDIIAGAVVVNDETLAEKIRFAQVAIGALLSPFDSWLLLR
SMKTLKLRVEKAQANTLKLLNFLKTHPEVEKVYYPTDTQNKGKAIQERQASGGGSVFSFTVKTEAKAKKFFESLKVALFA
VSLGGVETLVTHPSSLTHTEFPEEEKVARGVTRTLIRVAVGIEDADDLIADFKQALEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-83 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-84 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Coch_1685 YP_003141791.1 cystathionine gamma-synthase BAC0207 Protein 1e-63 41