Gene Information

Name : Coch_1503 (Coch_1503)
Accession : YP_003141610.1
Strain : Capnocytophaga ochracea DSM 7271
Genome accession: NC_013162
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1786031 - 1786777 bp
Length : 747 bp
Strand : -
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: fps:FP0964 3-oxoacyl-[acyl-carrier-protein] reductase

DNA sequence :
ATGAAATTATTAGAAGGAAAAACAGCTATTATCACTGGTGCTAGTAGAGGCATTGGGCGTGGTATAGCCAAAGTATTTGC
ATCCCACGGGGCAAATATTGCTTTTTCGTACAGTTCGTCAGTGGATGCTGCAATGGCATTAGAGAAAGAATTAGCTACAA
AAGGTGTGAAAGTAAAAGGCTACCAAAGCGATGCTTCTAACTTCGCACAGTCGCAAGAATTTGTAGATGCAGTGGTAGCG
GAATTTGGCACAGTTGATATTCTAGTAAACAACGCAGGTATCACTAAAGACAACCTACTGATGCGCATCAGTGAAGAAGA
TTTTGATAAGGTAATAGAAGTAAATCTCAAATCGGTGTTTAATATGACCAAAGCGGTACAGCGCATTATGCTTAAACAAC
GTAAAGGTTCTATTATCAATATGAGTAGTGTGGTGGGCGTGAAAGGCAATGCTGGACAGTCAAACTATGCAGCTTCTAAA
GCGGGAATTATCGGCTTTACCAAATCGATTGCCTTAGAGTTAGGCTCTCGAAATATCCGTTGCAATGCTATCGCTCCAGG
CTTTATAGAAACCGAAATGACAGCTGTACTTGACGAAAAAGTAGTACAAGGCTGGCGTGATGTTATCCCCCTAAAACGTG
GCGGACAACCCGAAGACGTAGCGAATGCTTGTGTGTTTTTAGCCTCTGATATGTCGGCTTACATCACAGGGCAAGTGCTC
AATGTTGATGGAGGAATGCTCACATAA

Protein sequence :
MKLLEGKTAIITGASRGIGRGIAKVFASHGANIAFSYSSSVDAAMALEKELATKGVKVKGYQSDASNFAQSQEFVDAVVA
EFGTVDILVNNAGITKDNLLMRISEEDFDKVIEVNLKSVFNMTKAVQRIMLKQRKGSIINMSSVVGVKGNAGQSNYAASK
AGIIGFTKSIALELGSRNIRCNAIAPGFIETEMTAVLDEKVVQGWRDVIPLKRGGQPEDVANACVFLASDMSAYITGQVL
NVDGGMLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-37 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 6e-36 42
ORF SG27 AAN62249.1 putative short-chain type dehydrogenase / reductase Not tested PAGI-3(SG) Protein 7e-19 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 5e-36 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-35 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-35 41