Gene Information

Name : Coch_1454 (Coch_1454)
Accession : YP_003141561.1
Strain : Capnocytophaga ochracea DSM 7271
Genome accession: NC_013162
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1715301 - 1716167 bp
Length : 867 bp
Strand : -
Note : KEGG: fps:FP0043 hydroxymethylbilane synthase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence :
ATGAACACCATACGCATAGGTACACGCGATAGTGAGTTGGCTCTCTGGCAAGCTAAAACGGTACAAAACCAATTAAAAAC
CTTAGGTTATCCCACTGAGATAGTAAGCACTAAATCTCACGGAGATATAGAGCTAAGCAAACCGCTCTACGAAATGGGGG
TTACCGGTATCTTTACCAAAGCGCTGGATATTGCCTTGCTCAATGGCGAAATAGATATTGCCGTACATAGTATGAAGGAC
GTACCCACGGCTTTACCTGAAGGAATTGCGGTAGGGGCAGTGCTCAAGCGCGGAAATCCTCACGATGTATTAGTATACAA
GGGTGACCTTTCGTTTTTGGAGGCTGAAATAGCAACTATAGCCACCAGCAGTTTACGACGCAAGGCGCAATGGTTACACC
GCTACCCGCATCATAATATAGAGAGTTTAAGGGGAAATGTAAATACCCGCTTGCAAAAACTCACCGATAACCCTTGGAAT
GGGGCTATCTTTGCTGCTGCGGGCTTGGAACGCATTAATAAATTACCTGAAAAACACTTGGTGCTGGATTGGATGCTACC
TGCACCTGCGCAAGGAGCTATCGTAGTGGTGGTGCGCGAGGATAACGTAGCCTTGCAGAAAAAACTACTCCCTCTCCACG
ACGATTATACTTATATAGCTACTCAGTTAGAACGCGATTTTCTTCGCGCTTTAGAAGGTGGGTGTACAGCACCTATTGGA
GCTTTTGCTGAGTTTAAAGATGATAAACTCTACTTCAAAGGAGGCTTGTGGAGCGAAGATGGCAAAGAGGCTTCGGTAAT
AGACGAAGTTCTCACTCAAATAGATGAATATACCGGAGAAAAACTTGCTACAATGATAAAAGGTTAA

Protein sequence :
MNTIRIGTRDSELALWQAKTVQNQLKTLGYPTEIVSTKSHGDIELSKPLYEMGVTGIFTKALDIALLNGEIDIAVHSMKD
VPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLEAEIATIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWN
GAIFAAAGLERINKLPEKHLVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEGGCTAPIG
AFAEFKDDKLYFKGGLWSEDGKEASVIDEVLTQIDEYTGEKLATMIKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-37 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-37 42