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Name : Coch_1202 (Coch_1202) Accession : YP_003141313.1 Strain : Capnocytophaga ochracea DSM 7271 Genome accession: NC_013162 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1409591 - 1410862 bp Length : 1272 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: bfs:BF1020 UDP-glucose-6 dehydrogenase DNA sequence : ATGAAATCATATAAAATAGGCATTATTGGGCTGGGTTATGTGGGTTTCCCCTTAGCTTGTCTGTTTGCCAAAAAATATCC CACAGTGGGTTACGACCCCTATACGGCGCGAGTGGAGAGCCTCAACACGGGTATTGACACTACGGGCGAAATCGGTAGTG AAATCCTTAAAGAGCGATTGGCTACCCACCTCATTTGCACTGCAAACCCAAATGACGCTAAGGATTGTAATGTGTACATA GTGGCAGTACCTACACCTATCGACCTCTATCAGCAACCTGACCTTACCGCTTTGCGCGAAGCGAGCCAAACAGTAGGTGC ATTGCTAAAAAAAGGAGATATAGTGATTTACGAATCGACTGTTTACCCAGGAGTGACGGAAGAGGTGTGTGTGCCTATCT TGGAAAGCGTGTCGGGGCTTGCATACAACCGCGATTTCTTTGTGGGTTACTCGCCTGAGCGCATCAACCCTGGTGATAAG CACCATACCGTGGAGACTATCTGCAAGATTACCTCAGGCTCTACCCCCGAGGTAGCACAGGAAATAGATACGCTCTACAA TTCAGTGCTGAGGGGAGGCACTTACCTTGCCCCGTCTATAAAAGTAGCCGAAGCCGCCAAAGTGATAGAGAACGCTCAGC GTGATGTGAATATCGCCTTTATGAATGAGATAGCGAAGATATTCAATATTTTAGAGATTGATACTAATGCGGTGATAGAT GCAGCGAGTAGCAAGTGGAACTTCTTGCCCTTCCGCCCCGGTCTGGTAGGTGGACACTGTATAGGGGTAGACCCTTACTA CCTCATACAAAAAGCTAAACTGCACGGCGTATCGCCACGCTTAATGATGGAAGCACGCAAGACGAACGACTCGATGGGAG GCTATATCGCCTATCAGATTATCAACCGCTTGTGTTTACAAGGTATGCCTGTGAAGGACAGCCGAATCCTGCTCTTAGGT TTTACATTCAAAGAAAACTGCCCCGACACTCGCAATACGAAAGTAGTGGATATCTACCGTACCCTTGAAAATTTTACTAA CAATATTACAGTGTATGACCCTTGTGCAGACCCTAAGCGCGCTCTTGAAGAGTACGGCATTGAGGTAGCTACTAAATCAC AAAACCTGCCTACCCACAACGATGTAGTGGTGCTTTGCGTGGCGCACCAAGAATTTCTGCAAATGAATATAGAAAATTAC TTAAAAGAAGACGGTATCGTTTACGATGTAAAGGGAAAGTTGAAAGTGAAGAAGAACGTGTTTAGGTTATAA Protein sequence : MKSYKIGIIGLGYVGFPLACLFAKKYPTVGYDPYTARVESLNTGIDTTGEIGSEILKERLATHLICTANPNDAKDCNVYI VAVPTPIDLYQQPDLTALREASQTVGALLKKGDIVIYESTVYPGVTEEVCVPILESVSGLAYNRDFFVGYSPERINPGDK HHTVETICKITSGSTPEVAQEIDTLYNSVLRGGTYLAPSIKVAEAAKVIENAQRDVNIAFMNEIAKIFNILEIDTNAVID AASSKWNFLPFRPGLVGGHCIGVDPYYLIQKAKLHGVSPRLMMEARKTNDSMGGYIAYQIINRLCLQGMPVKDSRILLLG FTFKENCPDTRNTKVVDIYRTLENFTNNITVYDPCADPKRALEEYGIEVATKSQNLPTHNDVVVLCVAHQEFLQMNIENY LKEDGIVYDVKGKLKVKKNVFRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-99 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-99 | 52 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-91 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Coch_1202 | YP_003141313.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-99 | 52 |
