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Name : rpsN (Coch_1160) Accession : YP_003141274.1 Strain : Capnocytophaga ochracea DSM 7271 Genome accession: NC_013162 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0199 EC number : - Position : 1377326 - 1377595 bp Length : 270 bp Strand : + Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : ATGGCTAAAGAATCAATGAAAGCCCGCGAGGTGAAACGTCAAAAGTTAGTAGCTAAATACGCTGCTAAACGCAAAGCTCT AAAAGAAGCTGGTGATTATGAAGCACTTCAGCTAATCCCTAAAAATGCTTCTCCTGTCCGTCTGCACAACCGTTGCAAAC TTACAGGACGCCCTAAAGGGTATATGCGTACCTTTGGAATTTCACGTGTGTTATTCCGCGAAATGGCAAACAAAGGATTA ATTCCTGGTGTAAAAAAAGCAAGTTGGTAA Protein sequence : MAKESMKAREVKRQKLVAKYAAKRKALKEAGDYEALQLIPKNASPVRLHNRCKLTGRPKGYMRTFGISRVLFREMANKGL IPGVKKASW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 1e-17 | 59 |
| ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 7e-18 | 59 |
