Gene Information

Name : Cyan8802_3926 (Cyan8802_3926)
Accession : YP_003139565.1
Strain : Cyanothece sp. PCC 8802
Genome accession: NC_013161
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 4040526 - 4041509 bp
Length : 984 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gme:Gmet_2330 NAD-d

DNA sequence :
GTGTCTAACATTCTAATTACTGGTGCGGCTGGATTTATTGGCTTTCATTTAAGCCAAAAATTATTACATCAAGGAGCAAC
TATTATTGGAATTGATAACATTAATAGTTACTATGATGTTTCTCTCAAAAAAGCTCGTCTTCAACAGATAGAAACAGACA
AAAATTTTAGGTTTTATCAATTAGATATTGCTAATAGAAAAACCATTTCAGAGTTATTTACTCAGCATACATTTGATTAC
GTTATTCATTTAGCTGCTCAAGCTGGAGTTCGCTATTCCTTAGAAAATCCTCATGCTTATGTTGATAGCAATCTAGTCGG
TTTTGTTAATATTCTTGAAGGGTGTCGTCATAGTCACATTAAACACCTCGTCTATGCTTCTTCGAGTTCGGTGTATGGAG
CTAATAAGAAAATTCCCTTTTCAACAGAAGATAATGTAGATCATCCGATGAGTTTATATGCTGCAACCAAGAAAGCCAAT
GAACTGATGGCTTATACTTATAGTCATTTGTATCGTTTACCTACGACTGGTTTAAGGTTTTTCACAGTTTATGGACCTTG
GGGTCGCCCAGATATGGCTTATTTTATGTTCACAAAAGCGATTCTAGCAGGTGAACCCATAAAAGTCTTTAATAATGGTA
AAATGAAGCGAGATTTTACCTATATTGATGACATTGTTGAAGGAATTATTCGAGTCATGAAACGCATTCCTAATCCCCTA
GAATCTGAGTTAGGAGTTCCTTATAAAGTTTATAATATTGGTAATAATCAACCCGTAGAATTACTCAAATTTATTGAGAT
TTTAGAAACCTGTTTAGGAAAAAAAGCCATCAAAAACTTTTTACCGATGCAACCAGGGGACGTACCGATGACCTACGCTG
ATATTGATGATTTAATGAAAGATGTAGGGTTTCGTCCTGATACACCACTAGAAATAGGGCTTGAAAAGTTTGTATCTTGG
TATCAAACTTATTATCAATTTTAA

Protein sequence :
MSNILITGAAGFIGFHLSQKLLHQGATIIGIDNINSYYDVSLKKARLQQIETDKNFRFYQLDIANRKTISELFTQHTFDY
VIHLAAQAGVRYSLENPHAYVDSNLVGFVNILEGCRHSHIKHLVYASSSSVYGANKKIPFSTEDNVDHPMSLYAATKKAN
ELMAYTYSHLYRLPTTGLRFFTVYGPWGRPDMAYFMFTKAILAGEPIKVFNNGKMKRDFTYIDDIVEGIIRVMKRIPNPL
ESELGVPYKVYNIGNNQPVELLKFIEILETCLGKKAIKNFLPMQPGDVPMTYADIDDLMKDVGFRPDTPLEIGLEKFVSW
YQTYYQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-95 60