Gene Information

Name : Cyan8802_3624 (Cyan8802_3624)
Accession : YP_003139275.1
Strain : Cyanothece sp. PCC 8802
Genome accession: NC_013161
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3697906 - 3698646 bp
Length : 741 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_3622 ABC transporter

DNA sequence : 
ATGGGCGATCGCGGCATTACCATCAGCCATCTGGGGGCATCCTACCGTAGCGTAGAAGCGTTACGCGATATTACCCTAAA
GGTGCAACCAGGACGACTAACAGGCATTATTGGACCAAATGGGGCAGGAAAAAGCACCTTAATGAAAGCAATGTTGGGTT
TAATTCCTGTTACGCAGGGAGAGGTTTATTATCAAGGTCAACCCTTGCATCAACAATTAAATCAAGTAGCCTACGTTCCA
CAGCGATCGCAGATTGATTGGACCTATCCGGCCACGGTCTGGGATGTGGTGATGATGGGTCGTGTACGTCAGACGGGATG
GTTGCGTCGCTTTTCGGCCGCGAGTCGTCGTCAAGGGTTAGAAGCCTTAGAACGGGTGGATATGGCAGCCTATCGTCAGC
GTCCCATTGGGGCACTATCAGGAGGACAACAACAACGGGTATTTTTAGCGCGATCGCTGGCACAAAATGGATCAATTTAT
CTGTTTGATGAGCCCTTTGTGGGAGTAGATCAAAAAACAGAAAATATCTTATTTAGTATCTTTCGAGAATTAGCTGCTAT
GGGAAAAATTGTCTTAGTGGTTAATCACGATCTTGGAGAGTCTATTACTAATTTTGATGACTTAATTTTATTGAATCGAG
AATTAATTGCCACAGGAAAACGACAATTCGTCCTAAAGGAAAATTATCTCGATCAAGCCTATGGGGGAAAAGTTTTGTTT
TTCAATTCTCAAGCAGCTTAA

Protein sequence : 
MGDRGITISHLGASYRSVEALRDITLKVQPGRLTGIIGPNGAGKSTLMKAMLGLIPVTQGEVYYQGQPLHQQLNQVAYVP
QRSQIDWTYPATVWDVVMMGRVRQTGWLRRFSAASRRQGLEALERVDMAAYRQRPIGALSGGQQQRVFLARSLAQNGSIY
LFDEPFVGVDQKTENILFSIFRELAAMGKIVLVVNHDLGESITNFDDLILLNRELIATGKRQFVLKENYLDQAYGGKVLF
FNSQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 9e-46 47
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-45 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-47 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-47 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-47 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-46 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-46 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan8802_3624 YP_003139275.1 ABC transporter BAC0400 Protein 2e-47 45
Cyan8802_3624 YP_003139275.1 ABC transporter BAC0350 Protein 1e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan8802_3624 YP_003139275.1 ABC transporter VFG0526 Protein 1e-47 44