Gene Information

Name : Cyan8802_3084 (Cyan8802_3084)
Accession : YP_003138762.1
Strain : Cyanothece sp. PCC 8802
Genome accession: NC_013161
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3116675 - 3117484 bp
Length : 810 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hch:HCH_03458 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase components

DNA sequence : 
ATGAATAACTCAAACAACAATCATAGCCGACTTGAAGCAAAAAACCTAACGCTTGCTTATAACAAAAAAAACATTATTAT
CGATCTTAATTTAGAAATTTCAACCGGCAAAATAACCATTTTAGTAGGGTCAAATGGTTGTGGAAAATCGACCTTATTAC
GCGGTATGGCACGGCTACTTAAACCTAAACAGGGTATGGTTTATTTGGATGGTAAAGCTATTTCTAAATTGTCAACAAAA
GCCGTTGCAAAACGATTAGGACTCCTTCCTCAAAATCCCACCTATCCCGAAGGATTAACCGTTAGAGATTTAGTAAGTCA
AGGTCGTTATCCCCATCAAACTTGGTGGCAACAATGGTCAAAAGATGATGAAGAATTAGTCAATAAAGCATTAATAAGCA
CCGAATTAATACCACTAGCTAATCGTCGCCTTGATACCTTATCAGGAGGGCAACGACAACGGGCGTGGATTGCTATGGCA
CTTGCTCAAGATACGGATATATTATTATTAGATGAACCCACCACTTTCTTAGATTTAGCCCATCAGGTAGAAATCTTAAA
TTTACTGTATCAATTAAATAAAAATCGCGGTAGAACAATCGTTATGGTCTTACACGATCTTAACCAAGCTTGTCGTTATG
CTGATTATTTAGTTGCCATAAAACAGGGAAAAATTTATGCCCAAGGACAGCCTGAAACTGTCATGACAGAGACAATGATT
CAAGCCGTATTTAACTTAGAATGTCGTATTATCCGTGATCCAGTTTCTCAAACTCCGATGTGTATTCCTATTAAGTGTTA
TTCAACTTGA

Protein sequence : 
MNNSNNNHSRLEAKNLTLAYNKKNIIIDLNLEISTGKITILVGSNGCGKSTLLRGMARLLKPKQGMVYLDGKAISKLSTK
AVAKRLGLLPQNPTYPEGLTVRDLVSQGRYPHQTWWQQWSKDDEELVNKALISTELIPLANRRLDTLSGGQRQRAWIAMA
LAQDTDILLLDEPTTFLDLAHQVEILNLLYQLNKNRGRTIVMVLHDLNQACRYADYLVAIKQGKIYAQGQPETVMTETMI
QAVFNLECRIIRDPVSQTPMCIPIKCYST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-57 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-61 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-61 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-62 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-59 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-59 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-59 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-59 47
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-32 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan8802_3084 YP_003138762.1 ABC transporter BAC0164 Protein 7e-58 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan8802_3084 YP_003138762.1 ABC transporter VFG0925 Protein 1e-68 52
Cyan8802_3084 YP_003138762.1 ABC transporter VFG1042 Protein 7e-58 51