Gene Information

Name : Cyan8802_1448 (Cyan8802_1448)
Accession : YP_003137199.1
Strain : Cyanothece sp. PCC 8802
Genome accession: NC_013161
Putative virulence/resistance : Virulence
Product : AAA ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1480215 - 1482683 bp
Length : 2469 bp
Strand : +
Note : PFAM: ATPase AAA; ATPase AAA central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: hypothetical protein; K03696 ATP-dependent Clp protease ATP-binding subu

DNA sequence :
ATGTTTGAACGCTTTACAGAAAAAGCTATTAAGGTCATAATGCTGGCTCAAGAAGAAGCTCGTCGTCTCGGCCATAACTT
CGTCGGGACCGAACAAATTCTCCTTGGGCTCATTGGAGAAGGAACTGGAGTCGCAGCGAAAGTTCTCAAATCCATGGGTG
TCAACCTAAAAGATGCCCGCATTGAGGTCGAAAAAATTATCGGTCGGGGTTCGGGATTTGTCGCCGTCGAAATTCCCTTT
ACCCCCAGAGCCAAACGAGTTCTCGAACTCTCCCTAGAAGAAGCTCGACAACTCGGCCACAACTACATCGGAACAGAACA
CCTCCTCCTGGGATTAATCCGCGAAGGGGAAGGAGTCGCCGCACGGGTTCTAGAAAACCTAGGGGTAGACTTATCCAAAG
TCCGTACCCAAGTGATTCGACAACTGGGCGAAACCGCCGAAGTAGCCGCAGGAGGGGGAACCTCTGGGCGTACAAAAACC
CCAACCCTCGACGAATTTGGCTCAAATCTAACCAATTTAGCCGGCGAAGGTAAACTCGATCCCGTCGTCGGACGACAAAA
AGAGATCGAACGGGTGATCCAAATTTTGGGACGCAGAACCAAAAATAACCCCGTTTTAATCGGAGAACCTGGGGTCGGAA
AAACCGCGATCGCAGAAGGACTCGCCCAACGCATCGCTAACAAAGATGTCCCCGATATCCTCGAAGATAAACGGGTCGTT
ACCCTCGATATTGGTTTACTCGTCGCTGGAACCAAGTATCGTGGGGAATTTGAAGAACGCCTCAAAAAAATCATGGACGA
AATTCGTCAAGCTGGAAATGTCATTCTGGTGATTGACGAAGTTCACACCCTGATCGGGGCAGGGGCTGCTGAAGGGGCGA
TCGATGCTGCGAACATCCTCAAACCCGCCTTAGCACGGGGCGAATTACAATGTATTGGGGCAACCACCCTCGATGAATAC
CGCAAGCACATCGAACGGGATGCAGCCCTAGAACGGCGTTTCCAACCCGTCATGGTAGGCGAACCCACCGTTAACGAAAC
CATCGAAATTCTCTACGGGTTACGGGAACGCTACGAACAGCACCACAAGCTCAAAATCCTTGATGAAGCCCTAGAAGCCG
CCGCCAAGCTCTCAGATCGTTATATTTCTGACCGCTATCTCCCCGATAAAGCCATTGACTTGATCGATGAAGCGGGATCA
CGGGTACGACTGATCAATTCCCAATTGCCACCAGCGGCCAAGGAATTGGACAAAGAACTGCGGGGCATCTTGAAGCAAAA
AGACGATGCCGTGCGAGCTCAGGACTTCGATAAAGCCGGGGAACTCCGCGATCGCGAAATGGAAATTAAGGCCGAAATTC
GCGCCATTTCCTCTAGTAAGAAAGCCGAAGGGGACAACGATGAACCCTTTGTTGATGCGGAAGAAATCGCCCACATCGTC
GCTTCTTGGACAGGGGTTCCTGTTAATAAACTGACGGAAACTGAATCCGAGAAGTTACTCCACATGGAGGATACCCTACA
CCAGCGTTTAATCGGTCAAGAAGACGCAGTTAAGGCGGTTTCACGGGCGATTCGTCGGGCTCGCGTTGGTCTGAAGAACC
CTAACCGTCCTATCGCTAGTTTTGTCTTCTCTGGTCCAACTGGGGTGGGTAAAACTGAGTTAACGAAGGCGTTGGCAGCC
TATTTCTTTGGGTCAGAAGATGCCATGATTCGTCTGGATATGTCCGAATACATGGAACGCCATACGGTATCTAAGTTAAT
TGGGTCGCCTCCTGGGTATGTGGGGTATAACGAAGGGGGTCAACTGACAGAAGCCGTTCGTCGTCGTCCCTATACGGTGG
TGCTCTTTGATGAAATCGAAAAAGCACACCCCGATGTCTTCAATATGCTGCTGCAAATTTTAGAAGACGGTCGTCTCACC
GATGCTAAGGGTCGGACAGTGGACTTTAAGAATACCCTGTTAATTATGACCTCTAATATTGGGTCAAAGGTGATTGAAAA
AGGCGGCGGTGGCCTCGGGTTTGAGTTTGAAGAAAACCAAAACGAAGCTCAGTATAATCGTATTCGATCGCTGGTTAATG
AGGAATTAAAGAACTATTTCCGTCCTGAATTTCTCAACCGTCTCGATGAGATTATTGTCTTCCGTCAATTGAACAAGGAA
GAAGTCAAGGAAATCTCCGAAATTCTGCTCAAGGAAGTCTTTAAACGGTTAACTGAAAAGCATATTAACTTACAAGTAAC
CGATAAGTTTAAGGAACGTTTGGTAGAAGAAGGCTATAATCCTGCCTATGGAGCTCGACCTTTACGTCGTGCCATTATGC
GCCTTCTCGAAGATGTCTTAGCGGAGGAAATTCTCTCAGGCCGTGTTGGTGAAGGAGATACCGCCATGGTAGACATTGAT
GAGGACGGTAAGGTTAAGGTGATTCCCTCTGAACGACGAGAAAATCTCTTGGCTAAAGCAACTGATTAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGETAEVAAGGGTSGRTKT
PTLDEFGSNLTNLAGEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPVMVGEPTVNETIEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGS
RVRLINSQLPPAAKELDKELRGILKQKDDAVRAQDFDKAGELRDREMEIKAEIRAISSSKKAEGDNDEPFVDAEEIAHIV
ASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAA
YFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLT
DAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEENQNEAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKE
EVKEISEILLKEVFKRLTEKHINLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVGEGDTAMVDID
EDGKVKVIPSERRENLLAKATD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan8802_1448 YP_003137199.1 AAA ATPase VFG0079 Protein 0.0 60
Cyan8802_1448 YP_003137199.1 AAA ATPase VFG0080 Protein 9e-151 53