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Name : Svir_08480 (Svir_08480) Accession : YP_003132735.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 865313 - 867640 bp Length : 2328 bp Strand : - Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region DNA sequence : ATGTCCCTTCATGACAAGATCGCCGACGAACTAGGTGTCCGCCCCGAACAGGTCCGCGCCGCCGTGGCCCTGCTGGACGA CGGTTCGACGGTGCCCTTCATCGCGCGCTACCGCAAGGAGGTGACCGGGGGCCTCGACGACACCCAGTTGCGCACGCTCG AGGACCGCCTGCGGTACTTACGCGAACTCGAGGAACGGCGCACCGTGATCCTCGAGTCCATCCGATCCCAGGGCAAGCTC ACCGAGGAGCTCGAGGCCCAGATCATGGCCGCCGAGGAGAAAGCGCGCCTGGAAGACATCTATCTGCCCTACAAGCCGAA ACGTCGCACCAAGGCCCAGATCGCCCGCGAAGCCGGCCTCGAACCGCTGGCCGACAGCCTGCTGTCCGACCCCACCCAGG ACCCCACGGCCGCCGCGGAGGCGTTCGTGGACCCCGATGCCGGCGTCGCCGACGCCGACGCCGCTCTCGCCGGGGCCCGC GCCATCCTCGTGGAGCGTTTCGCCGAGGACGCCGACCTCATCGGCGAACTGCGGGAGACGATGTGGTCCCAGGGTTGGCT GACCTCGAAAGTGCGAGAGGGCAAGGAGACCGAGGGCGCCAAGTTCGCCGACTACTTCGACTTCGCCGAACCGCTCGCGA AACTGCCGTCCCACCGCATCCTCGCCCTGTTCCGTGGGGAGAAGGAGGAGATCCTCGACCTCACCACCGAACCGACCGAA CCGGGGGGCGAGGCCGACCACTACGAGGCGCGCATCGCCGAGCGATACGGCATCACCGACGCGGGCAGGCCCGCCGACAA ATGGTTGCGCGACACCGTGCGTTGGGCCTGGCGCACCAAGATCCTGCTGCACCTGGGCATCGACCTGCGGATGCGACTGC GGCAGTTCGCCGAGGACGAGGCCGTGCGGGTGTTCGCGGCCAACCTGCGTGACCTGCTGTTGGCCGCACCCGCCGGCTCC CGGCCGACCATGGGCCTCGACCCCGGTTACCGCACCGGGGTGAAGGTGGCCGTCGTGGACGGCACCGGCAAGGTCGTCGC CACCGACACCATCTACCCGCACAAACCGCAGGACCGGTGGGACGAGGCGTTGGCCACGCTGGAACGCCTGGCCCGGCAAC ACCGGGTCGAACTGATCGCCATCGGCAACGGAACCGCGTCCCGGGAGACCGACAAACTCGCGGGCGAGCTCGTCAAACGG CATCCCGACCTGGGGCTCACCAAGGTCATGGTGTCGGAGGCGGGCGCGTCGGTGTACTCCGCGTCGGCGTACGCGGCGCA GGAACTACCCGACCTCGACGTGTCGTTGCGGGGAGCGGTGTCGATCGCCCGACGTCTGCAGGACCCCCTCGCCGAACTCG TCAAGATCGACCCCAAGTCGATCGGCGTCGGCCAGTATCAGCACGACGTGGCCGAGTCGAAATTGTCCCGCTCGCTGGAC GCCGTCGTGGAGGACTGTGTGAACGCCGTCGGCGTCGACCTCAACACCGCCTCCGCGCCTCTGCTCGCCCGGGTGTCGGG TATCGGGACGAGCCTGGCGGAGAACATCGTCGCCCACCGCGACGCCAACGGTCCCTTCCGTACCCGCGCCGCCCTCCGGG ACGTGCCGCGGCTCGGGCCGAAGGCCTTCGAACAGTGTGCGGGCTTCTTGCGCATCCCAGACGGGGACGACCCGTTGGAC GCCTCCGCCGTGCACCCCGAGTCCTACCCCGTGGTGCGGCGCATCCTCGACGAGACGAAGGTCGGCATCCGCGAGCTCAT CGGTGACTCCCGCACCCTGCGTTCGCTGCGGCCCGAGAAGTTCACGGACGAGAAGTTCGGCCTGCCCACGGTCACCGACA TCCTCGCCGAACTGGAGAAACCCGGCCGTGACCCCCGTCCCGAGTTCAAGACGGCCACCTTCGCCGAGGGCGTGGACACC CTGGAGGACCTCAAGCCGGGCATGCGCCTGGAGGGAGTGGTGACCAACGTCGCGGCGTTCGGTGCTTTCGTCGACATCGG TGTCCACCAAGACGGCCTCGTGCACGTCTCCGCCATGTCGCATCGGTACGTCTCCGACCCCCGGGACGTCGTCAAACCCG GCGACGTGGTGACGGTCAAGGTGCTGGACGTGGACGTGCCGCGGAAACGCATCTCGCTCACGCTGCGTCTCGACGACGAT CCCCGATCCTCGGGAGAGGGTCGCCGTTCCGGGCGACAGGGCGACGGGCAGCGGCACCCCGGCAAGCAGGGCCAGGGCAA ACAGGGCGCCCGCAAACGCGACAACCGTAAACCTCCGGCCGGTGGGGCCATGGCCGAGGCGTTGCGTAAGGCCGGTTACG GGATCTGA Protein sequence : MSLHDKIADELGVRPEQVRAAVALLDDGSTVPFIARYRKEVTGGLDDTQLRTLEDRLRYLRELEERRTVILESIRSQGKL TEELEAQIMAAEEKARLEDIYLPYKPKRRTKAQIAREAGLEPLADSLLSDPTQDPTAAAEAFVDPDAGVADADAALAGAR AILVERFAEDADLIGELRETMWSQGWLTSKVREGKETEGAKFADYFDFAEPLAKLPSHRILALFRGEKEEILDLTTEPTE PGGEADHYEARIAERYGITDAGRPADKWLRDTVRWAWRTKILLHLGIDLRMRLRQFAEDEAVRVFAANLRDLLLAAPAGS RPTMGLDPGYRTGVKVAVVDGTGKVVATDTIYPHKPQDRWDEALATLERLARQHRVELIAIGNGTASRETDKLAGELVKR HPDLGLTKVMVSEAGASVYSASAYAAQELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVAESKLSRSLD AVVEDCVNAVGVDLNTASAPLLARVSGIGTSLAENIVAHRDANGPFRTRAALRDVPRLGPKAFEQCAGFLRIPDGDDPLD ASAVHPESYPVVRRILDETKVGIRELIGDSRTLRSLRPEKFTDEKFGLPTVTDILAELEKPGRDPRPEFKTATFAEGVDT LEDLKPGMRLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSHRYVSDPRDVVKPGDVVTVKVLDVDVPRKRISLTLRLDDD PRSSGEGRRSGRQGDGQRHPGKQGQGKQGARKRDNRKPPAGGAMAEALRKAGYGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 63 |
