|
Name : Svir_07500 (Svir_07500) Accession : YP_003132643.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Virulence Product : L-glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 776718 - 778142 bp Length : 1425 bp Strand : - Note : PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I DNA sequence : GTGTCCACCACTCCAGACGATGTCCTCCGTCTGATCACGGACGAGGGCGTGCAGTTTGTCGACGTGAGGTTTTGTGACCT GCCGGGCGTCATGCAGCACTTCACCGTCCCCGCGTCGACGCTTGACGCGGACGTGTTCGAGGAGGGACTCGCGTTCGACG GGTCGTCGATCCGTGGCTTCCAATTGATCCACGAGTCCGACATGCTGTTGCTTCCCGACCCCGCCACCGCCCGTATCGAT CCGTTCCGCAAACACAAGACGCTGTCGCTGAACTTCTTCGTGCACGACCCGTTCACCCGGGAGCCGTACAGCCGCGACCC ACGGAACATCGCGCGTAAGGCCGAGCAGTACATCGCCGAGACCGGTATCGCCGACACGGCGTTCTTCGGCGCCGAAGCGG AGTTCTACATCTTCGACTCGGTGCGCTTCGACTACTCCGAGCACGCGGCCTTCCACGAGATCGACTCGATCGAAGGCTGG TGGAACACCGGCCGGGAGGAGGAAGGCGGGAACAAGGGCTACAAGACCAAATTCAAGGGTGGCTATTTCCCGGTGCCTCC GGTGGACCACTACGCCGATCTGCGCGACGACATCTCGCGAACCCTGATCGAATCAGGGTTCGTCCTGGAACGCGCTCACC ACGAGGTGGGCACCGCAGGACAAACCGAGATCAACTACAAGTTCAACACTCTGTTGCACGCGGCCGACGATCTGCAACTG TTCAAGTACATCGTCAAGAACACGGCTTTCGCCGCGGGTAAAACCGCGACCTTCATGCCGAAACCGTTGTTCGGGGACAA CGGCTCCGGTATGCACTGCCATCAGTCCCTGTGGAAGGACGGGGAACCGTTGTTCTACGACGAGTCCGGCTATGCGGGCT TGTCGGACACGGCTCGGTACTACATCGGTGGCATTCTGACGCACGCGCCGAGTCTGCTGGCGTTCACCAACCCGACGATC AATTCCTATCGCCGGTTGGTGCCGGGCTACGAGGCGCCGGTGAGCCTGGTGTATTCACAACGGAACCGCTCGGCCTGTGT TCGTATCCCGATCACCGGCAGCAATGCGAAGGCCAAGCGCATCGAGTTCCGTTGTCCTGATTCGTCGGGGAACCCGTATC TGGCGTTCGCGGCGATGGTGATGGCCGGTCTCGACGGCATCAAGAACAAGATCGAGCCGCCGGAACCCATCGACAAGGAC CTCTACGAGTTGCCCCCCGAGGAGGCCAAGAACGTCAAGCTGGTGCCGGGCGACCTGGGTACCGCGCTCGACGCGCTGGA ATCCAACCACGACTTCCTGCTGGAAGGCGGCGTGTTCACGTCGGATGTGATCGAGACGTGGATCTCGTACAAGCGGGAGA ACGAGATCGAAGCGCTGCGACTGCGCCCCCACCCCTACGAATTCGCCCTGTACTACGACGTGTGA Protein sequence : MSTTPDDVLRLITDEGVQFVDVRFCDLPGVMQHFTVPASTLDADVFEEGLAFDGSSIRGFQLIHESDMLLLPDPATARID PFRKHKTLSLNFFVHDPFTREPYSRDPRNIARKAEQYIAETGIADTAFFGAEAEFYIFDSVRFDYSEHAAFHEIDSIEGW WNTGREEEGGNKGYKTKFKGGYFPVPPVDHYADLRDDISRTLIESGFVLERAHHEVGTAGQTEINYKFNTLLHAADDLQL FKYIVKNTAFAAGKTATFMPKPLFGDNGSGMHCHQSLWKDGEPLFYDESGYAGLSDTARYYIGGILTHAPSLLAFTNPTI NSYRRLVPGYEAPVSLVYSQRNRSACVRIPITGSNAKAKRIEFRCPDSSGNPYLAFAAMVMAGLDGIKNKIEPPEPIDKD LYELPPEEAKNVKLVPGDLGTALDALESNHDFLLEGGVFTSDVIETWISYKRENEIEALRLRPHPYEFALYYDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 3e-84 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Svir_07500 | YP_003132643.1 | L-glutamine synthetase | VFG1399 | Protein | 2e-175 | 74 |
